Related Experiment Video
Updated: Feb 1, 2026

Pairwise Growth Competition Assay for Determining the Replication Fitness of Human Immunodeficiency Viruses
Published on: May 4, 2015
Entropic constraints on the steady-state fitness of competing self-replicators
Owen Leddy1, Zhiyue Lu1, Aaron R Dinner1
1Department of Chemistry and James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA.
Abstract:
Recent developments in nonequilibrium statistical mechanics suggest that the history of entropy production in a system determines the relative likelihood of competing processes. This presents the possibility of interpreting and predicting the self-organization of complex active systems, but existing theories rely on quantities that are challenging to obtain. Here, we address this issue for a general class of Markovian systems in which two types of self-replicating molecular assemblies (self-replicators) compete for a pool of limiting resource molecules within a nonequilibrium steady state. We derive exact relations that show that the relative fitness of these species depends on a path function, ψ, which is a sum of the entropy production and a relative-entropy term. In the limit of infinite path length, ψ reduces to the entropy production. We demonstrate use of the theory by numerically studying two models inspired by biological systems, including a simplified model of a competition between strains of the yeast prion Sup35 in the presence of driven disaggregation by the ATPase Hsp104.
Related Concept Videos
Induced-fit Model
Enzymes exhibit substrate specificity, meaning that they can only bind to certain substrates. This is mainly determined by the shape and chemical...
Chromosome Replication
Constraints and Statical Determinacy
DNA Replication
Replication in Prokaryotes
DNA replication...
Replication in Prokaryotes
Replication in Eukaryotes

