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Published on: September 27, 2024
Identification of ADAR1 adenosine deaminase dependency in a subset of cancer cells
Hugh S Gannon1,2, Tao Zou1,2, Michael K Kiessling3,4
1Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.
Abstract:
Systematic exploration of cancer cell vulnerabilities can inform the development of novel cancer therapeutics. Here, through analysis of genome-scale loss-of-function datasets, we identify adenosine deaminase acting on RNA (ADAR or ADAR1) as an essential gene for the survival of a subset of cancer cell lines. ADAR1-dependent cell lines display increased expression of interferon-stimulated genes. Activation of type I interferon signaling in the context of ADAR1 deficiency can induce cell lethality in non-ADAR1-dependent cell lines. ADAR deletion causes activation of the double-stranded RNA sensor, protein kinase R (PKR). Disruption of PKR signaling, through inactivation of PKR or overexpression of either a wildtype or catalytically inactive mutant version of the p150 isoform of ADAR1, partially rescues cell lethality after ADAR1 loss, suggesting that both catalytic and non-enzymatic functions of ADAR1 may contribute to preventing PKR-mediated cell lethality. Together, these data nominate ADAR1 as a potential therapeutic target in a subset of cancers.
Insights
Adenosine deaminase acting on RNA 1 (ADAR1) is essential for some cancer cells. Its deficiency activates PKR, leading to cell death, suggesting ADAR1 as a potential cancer therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Identifying cancer-specific vulnerabilities is crucial for developing targeted therapies.
- Adenosine deaminase acting on RNA 1 (ADAR1) is implicated in various cellular processes.
Purpose of the Study:
- To identify novel cancer therapeutic targets through systematic exploration of cancer cell vulnerabilities.
- To investigate the role of ADAR1 in cancer cell survival and the mechanisms underlying its essentiality.
Main Methods:
- Genome-scale loss-of-function screens were employed to identify essential genes in cancer cell lines.
- Analysis of gene expression, specifically interferon-stimulated genes and double-stranded RNA sensors like protein kinase R (PKR).
- Functional assays involving gene inactivation, mutation, and overexpression to assess cell lethality and signaling pathway activation.
Main Results:
- ADAR1 was identified as an essential gene for the survival of a subset of cancer cell lines.
- ADAR1-deficient cells exhibited increased expression of interferon-stimulated genes and activation of the PKR pathway.
- Disruption of PKR signaling or specific ADAR1 functions partially rescued cell lethality, indicating a role for both catalytic and non-enzymatic functions of ADAR1.
Conclusions:
- ADAR1 is a critical survival factor in a subset of cancers.
- ADAR1's function, including its non-enzymatic roles, is important in preventing PKR-mediated cell death.
- ADAR1 represents a promising therapeutic target for specific cancer types.
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