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Updated: Jan 31, 2026

Three-dimensional Quantification of Intestinal Mucus Using Whole-mount Tissue Imaging
Published on: September 12, 2025
Lipids alter microbial transport through intestinal mucus
Taylor L Carlson1, Hasan Yildiz2, Zaineb Dar3
1Department of Chemical Engineering, Northeastern University, Boston, Massachusetts, United States of America.
Abstract:
Mucus constitutes a protective layer which coats the gastrointestinal tract, controlling interactions of both commensal and pathogenic microbes with underlying tissues. Changes to the mucus barrier, for example due to altered mucin expression or external stimuli, may impact interactions with microbes and thus potentially contribute to altered gut homeostasis, onset of inflammation, or pathogen invasion. Food-associated stimuli, including lipids, have been shown to change mucus barrier properties and reduce transport of model drug carriers through mucus. Here, we explore the impact of lipids, specifically triglycerides in a model intestinal medium mimicking a fed state, on Escherichia coli (E. coli) transport through mucus by directly imaging swimming patterns and analyzing associated changes in mucus structure. Lipids in model fed state intestinal contents reduced E. coli speed and track linearity within mucus. These changes may be due in part to changes in molecular interactions within the mucus network as well as crowding of the mucus network by lipid emulsion droplets, which visibly stay intact in the mucus gel. In addition, observed physical interactions between bacteria and lipid structures may impact microbial speed and trajectories. As lipids are normal food components and thus represent safe, mild stimuli, these results support exploration of lipid-based strategies to alter the mucus barrier to control interactions with microbes and potentially prevent microbial invasion of underlying epithelium.
Insights
Dietary lipids in the gut reduce the speed and straightness of E. coli movement through mucus. This mucus barrier alteration by food components may offer strategies to control microbial interactions and prevent pathogen invasion.
Area of Science:
- Gastroenterology
- Microbiology
- Biophysics
Background:
- The gastrointestinal mucus layer is crucial for regulating host-microbe interactions.
- Alterations in mucus barrier properties can influence gut homeostasis, inflammation, and pathogen invasion.
- Food components, such as lipids, can modify mucus characteristics and affect transport through it.
Purpose of the Study:
- To investigate the impact of dietary lipids on the transport of Escherichia coli (E. coli) through a model intestinal mucus.
- To analyze changes in mucus structure and E. coli swimming behavior in the presence of lipids.
Main Methods:
- Direct imaging of E. coli swimming patterns within a model intestinal medium mimicking a fed state.
- Analysis of mucus structure and E. coli track linearity and speed in the presence of triglycerides.
- Observation of physical interactions between E. coli and lipid emulsion droplets.
Main Results:
- Lipids in the model fed state intestinal contents significantly reduced E. coli speed and track linearity within the mucus.
- Lipid emulsion droplets remained intact within the mucus gel, potentially crowding the network.
- Physical interactions between E. coli and lipid structures were observed, impacting bacterial movement.
Conclusions:
- Dietary lipids alter mucus properties, impeding E. coli motility.
- Lipid-induced changes in mucus structure and direct bacterial-lipid interactions contribute to reduced bacterial speed.
- Lipid-based strategies could be explored to modulate the mucus barrier for controlling microbial interactions and preventing epithelial invasion.
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