Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration01:16

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration

2.9K
A covalently bonded heteronuclear diatomic molecule can be modeled as two vibrating masses connected by a spring. The vibrational frequency of the bond can be expressed using an equation derived from Hooke's law, which describes how the force applied to stretch or compress a spring is proportional to the displacement of the spring. In this case, the atoms behave like masses, and the bond acts like a spring.
According to Hooke's law, the vibrational frequency is directly proportional to...
2.9K
Approximate Integration01:24

Approximate Integration

50
In many practical and theoretical contexts, the exact value of a definite integral may be inaccessible. This limitation typically arises when the antiderivative of a function is either unknown or cannot be expressed in a closed mathematical form. Alternatively, it can occur when a function is defined not by a formula but by a finite set of empirical data points, such as those collected during experiments. In these cases, approximate integration techniques provide a valuable solution.One of the...
50
Linearization and Approximation01:26

Linearization and Approximation

59
Linearization is a mathematical technique used to approximate complex, nonlinear functions with simpler linear models in the vicinity of a chosen reference point. The method is based on the idea that, although a function may be difficult to evaluate exactly, its behavior near a specific input value can often be closely approximated by the tangent line at that point. This approach is particularly useful when small deviations from a known value are involved.Consider the square root function, for...
59
Accuracy, limits, and approximation01:28

Accuracy, limits, and approximation

1.3K
Accuracy, limits, and approximations are common in many fields, especially in engineering calculations. These concepts are imperative for ensuring that a given value is as close as possible to its true value.
Accuracy is defined as the closeness of the measured value to the true or actual value. In engineering mechanics, repeated measurements are taken during theoretical or experimental analyses to ensure that the result is precise and accurate.
The accuracy of any solution is based on the...
1.3K
Application of Linearization and Approximation01:29

Application of Linearization and Approximation

90
A drone flying through complex terrain often relies on more than one sensing method to estimate small changes in altitude. Along with direct measurements, air pressure provides a useful indirect indicator of vertical movement. Atmospheric pressure decreases as altitude increases, and this relationship is commonly described using an exponential model. Although accurate, converting pressure measurements into altitude values requires calculations that are too complex to perform repeatedly during...
90
Trial and Error and Algorithm01:12

Trial and Error and Algorithm

407
A problem-solving strategy is a plan of action used to find a solution. Different strategies have distinct action plans. Trial and error involves trying different solutions until one works. For instance, to fix a broken printer, you might check ink levels, ensure the paper tray isn't jammed, and verify the printer's connection to your laptop. This method can be time-consuming but is commonly used. Thomas Edison, for example, used trial and error to find a suitable filament for the light...
407

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Draft genome sequence of <i>Denitratisoma</i> sp. strain agr-D3, isolated from common reed using a droplet-based cultivation method.

Microbiology resource announcements·2026
Same author

Draft genome sequence of <i>Dongia</i> sp. strain agr-C8, isolated from the rhizosphere of <i>Phragmites australis</i> using a droplet-based cultivation method.

Microbiology resource announcements·2025
Same author

Complete genome sequence of a member of a potentially novel genus within the family Opitutaceae isolated from a liquid medium used for co-cultivating duckweeds and river water-derived microbes.

Microbiology resource announcements·2025
Same author

Improvements in the Duckweed-Microbe Co-cultivation Method for the Stable and Efficient Isolation of Rarely Cultivated Bacteria Using Microfilter Membranes.

Microbes and environments·2025
Same author

UV photodissociation of oxygen dimer cation O4+ studied by an ion imaging technique and theoretical calculations.

The Journal of chemical physics·2025
Same author

Correction to "Machine Learning-Enhanced Structure-Based Gaussian Expansion for Efficient Wavepacket Calculations".

The journal of physical chemistry letters·2025
Same journal

A data-driven modeling study on the accurate identification of Doppler-free saturated absorption spectra in diatomic tellurium (130Te2).

The Journal of chemical physics·2026
Same journal

Anharmonic phonons via quantum thermal bath simulations.

The Journal of chemical physics·2026
Same journal

Quantum simulation of alignment dependent differential cross sections in co-propagating molecular beams at cold collision energies.

The Journal of chemical physics·2026
Same journal

Non-additive ion effects on the coil-globule equilibrium of a generic polymer in aqueous salt solutions.

The Journal of chemical physics·2026
Same journal

Insights into the unexpected small reduction of the temperature of maximum density of water by lithium chloride addition.

The Journal of chemical physics·2026
Same journal

Optical frequency comb double-resonance spectroscopy of the 9030-9175 cm-1 states of ethylene.

The Journal of chemical physics·2026
See all related articles

Related Experiment Video

Updated: Jan 31, 2026

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
06:37

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

Published on: September 17, 2021

5.1K

An efficient approximate algorithm for nonadiabatic molecular dynamics.

Kota Hanasaki1, Manabu Kanno1, Thomas A Niehaus2

  • 1Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.

The Journal of Chemical Physics
|January 3, 2019
PubMed
Summary
This summary is machine-generated.

This study enhances a nonadiabatic surface hopping method by replacing its gradient estimation with numerical derivatives. The improved method shows wider applicability and robustness for modeling complex chemical dynamics.

More Related Videos

Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures
07:05

Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures

Published on: February 15, 2022

2.9K
Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
15:05

Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation

Published on: May 20, 2020

9.3K

Related Experiment Videos

Last Updated: Jan 31, 2026

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
06:37

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

Published on: September 17, 2021

5.1K
Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures
07:05

Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures

Published on: February 15, 2022

2.9K
Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
15:05

Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation

Published on: May 20, 2020

9.3K

Area of Science:

  • Computational Chemistry
  • Quantum Dynamics
  • Theoretical Chemistry

Background:

  • Nonadiabatic surface hopping is crucial for simulating quantum dynamics in molecules.
  • Existing methods, like Yu et al.'s extension of Zhu-Nakamura theory, face limitations in applicability and robustness.
  • Accurate estimation of diabatic gradients is essential for reliable surface hopping calculations.

Purpose of the Study:

  • To improve the nonadiabatic surface hopping calculation method proposed by Yu et al.
  • To enhance the robustness and applicability of the Zhu-Nakamura theory-based method.
  • To introduce a novel diabatic gradient estimation algorithm for nonadiabatic dynamics.

Main Methods:

  • Modification of the Yu et al. nonadiabatic surface hopping method.
  • Replacement of simple interpolation for diabatic gradient estimation with numerical derivatives of adiabatic gradients.
  • Application and testing of the modified method on analytic and ab initio models of nonadiabatic dynamics.

Main Results:

  • The modified method demonstrates wider applicability compared to the original Yu et al. approach.
  • Numerical simulations confirm enhanced robustness of the new nonadiabatic surface hopping technique.
  • The algorithm effectively handles complex nonadiabatic dynamics across various models.

Conclusions:

  • The proposed modification significantly improves the nonadiabatic surface hopping method.
  • The new approach offers a more robust and versatile tool for studying molecular dynamics.
  • Potential applications include excited-state dynamics in biomolecules and radiationless decay processes.