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Updated: Jan 31, 2026

High-Pressure NMR Experiments for Detecting Protein Low-Lying Conformational States
Published on: June 29, 2021
Conformational Properties Relevant to the Amyloidogenicity of β2-Microglobulin Analyzed Using Pressure- and
Kazumasa Sakurai1,2, Akihiro Maeno3, Young-Ho Lee2,4
1High Pressure Protein Research Center, Institute of Advanced Technology , Kindai University , 930 Nishimitani , Kinokawa, Wakayama 649-6493 , Japan.
Abstract:
β2-Microglobulin (β2m) is associated with dialysis-related amyloidosis. In vitro experiments have shown that β2m forms amyloid fibrils at acidic pHs in the presence of moderate concentrations of salt. Previous studies suggested that acid-denatured β2m has a hydrophobic residual structure, and the exposure of the hydrophobic residues enhances the association with seeds or other β2m monomers. However, the nature of the residual structure relevant to its amyloidogenicity remains to be investigated. To understand the structural properties of acid-denatured β2m and the role of salt, we investigated pressure- and salt concentration-dependent conformational changes by nuclear magnetic resonance spectroscopy and other methods. Here, pressure was utilized to characterize the conformers existing in a conformational equilibrium at ambient pressure. The obtained pressure- and salt concentration-dependent chemical shift data were simultaneously subjected to principal component analysis to characterize individual conformational change events. Unexpectedly, the addition of salt induced an expansion of the β2m molecule, which likely resulted from the exclusion of the N-terminal region from the hydrophobic cluster region. The dissected chemical shift patterns for the salt-induced conformational change and other experimental data indicated that this conformational change caused a rigidification in the intrinsic hydrophobic cluster, leading to the observed amyloidogenicity.
Insights
Salt unexpectedly expands beta2-microglobulin (β2m), revealing a rigid hydrophobic core. This structural change explains how β2m forms amyloid fibrils linked to dialysis-related amyloidosis.
Area of Science:
- Biochemistry
- Structural Biology
- Biophysics
Background:
- Beta2-microglobulin (β2m) is implicated in dialysis-related amyloidosis.
- In vitro studies show β2m forms amyloid fibrils at acidic pH and moderate salt concentrations.
- Acid-denatured β2m exhibits a hydrophobic residual structure, promoting aggregation.
Purpose of the Study:
- To investigate the structural properties of acid-denatured β2m.
- To elucidate the role of salt concentration in β2m conformational changes.
- To understand the mechanism of β2m amyloidogenesis.
Main Methods:
- Nuclear magnetic resonance (NMR) spectroscopy.
- Pressure- and salt concentration-dependent studies.
- Principal component analysis (PCA) of chemical shift data.
Main Results:
- Salt addition induced an unexpected expansion of the β2m molecule.
- N-terminal region exclusion from the hydrophobic cluster was observed.
- Salt-induced conformational changes rigidified the hydrophobic core, enhancing amyloidogenicity.
Conclusions:
- Salt-induced expansion and subsequent rigidification of the hydrophobic cluster are key to β2m amyloid formation.
- Understanding these structural changes offers insights into dialysis-related amyloidosis.
- This study clarifies the role of salt in the amyloidogenic pathway of β2m.
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