Related Experiment Video
Updated: Jan 31, 2026

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification
Published on: November 15, 2017
Plasma proteome profiling of high-altitude polycythemia using TMT-based quantitative proteomics approach
Zongkui Wang1, Fengjuan Liu1, Shengliang Ye1
1Institute of Blood Transfusion, Chinese Academy of Medical Sciences & Peking Union Medical College, Chengdu 610052, China.
High-altitude polycythemia (HAPC) involves altered plasma proteins, particularly in complement and coagulation pathways. CNDP1 shows promise as a diagnostic biomarker for HAPC.
Area of Science:
- Proteomics
- Biochemistry
- High-altitude medicine
Background:
- High-altitude polycythemia (HAPC) is a significant health issue in high-altitude regions.
- The underlying pathogenesis of HAPC remains unclear despite extensive research.
Purpose of the Study:
- To investigate plasma proteomic changes in HAPC patients using TMT-based quantitative proteomics.
- To identify potential diagnostic biomarkers for HAPC.
Main Methods:
- Comparative quantitative proteomics analysis using TMT labeling.
- Bioinformatics analysis (GO, KEGG pathway analysis) of identified proteins.
- ELISA validation and ROC analysis for biomarker assessment.
Main Results:
- Identified 818 proteins, with 19 differentially expressed between HAPC patients and healthy controls.
- Dysregulated proteins are primarily involved in complement/coagulation cascades, inflammation, and immune response.
- A panel of five proteins (C4A, C6, CALR, MASP1, CNDP1) achieved a high AUC (0.919) for HAPC diagnosis, with CNDP1 identified as a robust biomarker.
Conclusions:
- Proteomic alterations in complement, coagulation, and immune pathways are associated with HAPC.
- A combination of plasma proteins, notably CNDP1, demonstrates significant diagnostic potential for HAPC.
- This study provides valuable proteomic data and identifies potential biomarkers for HAPC diagnosis and therapy.
Related Concept Videos
Proteomics
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
Ribosome Profiling
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
Composition of Blood Plasma
Frustration and Conflict: Approach-Approach, Approach-Avoidance
One common type of conflict is the Approach–Approach Conflict. In this case, a person faces two desirable...
Enlargement of the Plasma Membrane
Plasma Membrane in Bacteria and Archaea

