Discovery of Tetrahydropyridopyrimidines as Irreversible Covalent Inhibitors of KRAS-G12C with In Vivo Activity

Jay B Fell1, John P Fischer1, Brian R Baer1

  • 1Array BioPharma, Inc., 3200 Walnut Street, Boulder, Colorado 80301, United States.

Insights

Researchers developed novel tetrahydropyridopyrimidines that irreversibly inhibit the KRAS-G12C mutation in cancer. This breakthrough offers a promising new therapeutic strategy for difficult-to-treat cancers driven by this common mutation.

Area of Science:

  • Oncology
  • Medicinal Chemistry
  • Molecular Biology

Background:

  • KRAS is a frequently mutated oncogene in human cancers, often linked to poor prognosis and treatment resistance.
  • Targeting mutated KRAS has been a significant challenge in cancer therapy research.
  • Recent advances show potential in directly inhibiting KRAS-G12C mutations using covalent small molecules.

Purpose of the Study:

  • To discover and develop novel irreversible covalent inhibitors targeting the KRAS-G12C mutation.
  • To evaluate the in vivo activity, pharmacokinetics (PK), and pharmacodynamics (PD) of a lead compound.

Main Methods:

  • Discovery of a series of tetrahydropyridopyrimidine compounds.
  • Design of electrophilic small molecules targeting the cysteine at codon 12 of KRAS-G12C.
  • In vivo studies to assess compound efficacy, PK, and PD.

Main Results:

  • Identification of tetrahydropyridopyrimidines as potent irreversible covalent inhibitors of KRAS-G12C.
  • Demonstration of in vivo activity for the identified inhibitors.
  • Detailed characterization of the PK/PD and efficacy profile of a specific compound (compound 13).

Conclusions:

  • Tetrahydropyridopyrimidines represent a viable class of irreversible covalent inhibitors for KRAS-G12C.
  • The developed compounds show promising in vivo efficacy, offering a new therapeutic avenue.
  • Compound 13 exhibits favorable PK/PD and efficacy, warranting further investigation for cancer treatment.

Related Concept Videos

Covalent Bonds01:29

Covalent Bonds

Overview
162.1K
Covalent Bonds01:08

Covalent Bonds

Overview
When two atoms share electrons to complete their valence shells, they create a covalent bond. An atom's electronegativity—the force with which shared electrons are pulled towards an atom—determines how the electrons are shared. Molecules formed with covalent bonds can be either polar or nonpolar. Atoms with similar electronegativities form nonpolar covalent bonds; the electrons are shared equally. Atoms with different electronegativities share electrons unequally,...
10.8K
Network Covalent Solids02:18

Network Covalent Solids

Network covalent solids contain a three-dimensional network of covalently bonded atoms as found in the crystal structures of nonmetals like diamond, graphite, silicon, and some covalent compounds, such as silicon dioxide (sand) and silicon carbide (carborundum, the abrasive on sandpaper). Many minerals have networks of covalent bonds.
To break or to melt a covalent network solid, covalent bonds must be broken. Because covalent bonds are relatively strong, covalent network solids are typically...
16.2K
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
9.6K
Covalent Bonding and Lewis Structures02:46

Covalent Bonding and Lewis Structures

Compared to ionic bonds, which results from the transfer of electrons between metallic and nonmetallic atoms, covalent bonds result from the mutual attraction of atoms for a “shared” pair of electrons.
61.3K
Reversible and Irreversible Processes01:14

Reversible and Irreversible Processes

The thermodynamic processes can be classified into reversible and irreversible processes. The processes that can be restored to their initial state are called reversible processes. It is only possible if the process is in quasi-static equilibrium, i.e., it takes place in infinitesimally small steps, and the system remains at equilibrium However, these are ideal processes and do not occur naturally. An ideal system undergoing a reversible process is always in thermodynamic equilibrium within...
5.8K