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Published on: May 2, 2018
Evolution of Daptomycin Resistance in Coagulase-Negative Staphylococci Involves Mutations of the Essential
Jhih-Hang Jiang1, Carina Dexter1, David R Cameron1
1Infection and Immunity Program, Monash Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton, Victoria, Australia.
Abstract:
Coagulase-negative staphylococci (CoNS) represent one of the major causes of health care- and medical device-associated infections. Emerging antimicrobial resistance has complicated the treatment of systemic infections caused by CoNS. Here, we describe the prevalence of antimicrobial resistance in clinical CoNS strains from a tertiary care hospital over a 4-year period, and we observed a significant increase in resistance to daptomycin. Notably, Staphylococcus capitis accounted for the majority of these daptomycin-resistant (DAP-R) CoNS. To further investigate the mechanisms of daptomycin resistance in CoNS, daptomycin-susceptible clinical strains of S. capitis and Staphylococcus epidermidis underwent in vitro daptomycin exposure to generate DAP-R CoNS mutants. Unlike that seen with Staphylococcus aureus, alteration of cell surface charge was not observed in the DAP-R CoNS strains, but biofilm formation was compromised. Whole-genome sequencing analysis of the DAP-R CoNS strains identified single nucleotide polymorphisms (SNPs) in walKR, the essential two-component regulatory system controlling cell wall biogenesis. PCR and sequencing of walK and walR from 17 DAP-R CoNS clinical isolates identified seven nonsynonymous mutations. The results were confirmed by the recreation of the walK SNP in S. epidermidis, which resulted in reduced susceptibility to daptomycin and vancomycin. This study highlights the significance of CoNS in evolving daptomycin resistance and showed that walKR is shared among the staphylococcal species and is involved in antibiotic resistance development. Notably, we did not observe mutations in genes responsible for phospholipid biosynthesis or an altered cell surface charge, suggesting that reduced daptomycin susceptibility in CoNS may emerge in a fashion distinct from that in S. aureus.
Insights
Antimicrobial resistance in coagulase-negative staphylococci (CoNS) is increasing. This study found that mutations in the walKR system drive daptomycin resistance in CoNS, differing from Staphylococcus aureus mechanisms.
Area of Science:
- Microbiology
- Infectious Diseases
- Antimicrobial Resistance
Background:
- Coagulase-negative staphylococci (CoNS) are significant causes of healthcare-associated infections.
- Emerging antimicrobial resistance in CoNS complicates treatment options.
- Daptomycin resistance in CoNS is a growing concern.
Purpose of the Study:
- To investigate the prevalence and mechanisms of daptomycin resistance in clinical CoNS strains.
- To compare daptomycin resistance mechanisms in CoNS with those in Staphylococcus aureus.
- To identify genetic factors contributing to daptomycin resistance in CoNS.
Main Methods:
- Surveillance of antimicrobial resistance in clinical CoNS isolates over four years.
- In vitro generation of daptomycin-resistant (DAP-R) CoNS mutants from susceptible strains.
- Whole-genome sequencing and targeted gene analysis (PCR, sequencing) of DAP-R strains.
- Functional validation by recreating specific mutations in Staphylococcus epidermidis.
Main Results:
- A significant increase in daptomycin resistance was observed in clinical CoNS strains, particularly Staphylococcus capitis.
- Daptomycin-resistant CoNS mutants showed compromised biofilm formation but not altered cell surface charge.
- Whole-genome sequencing identified single nucleotide polymorphisms (SNPs) in the essential two-component system walKR.
- Seven nonsynonymous mutations in walK or walR were found in clinical DAP-R isolates.
- Recreating a walK SNP in S. epidermidis reduced susceptibility to daptomycin and vancomycin.
Conclusions:
- The walKR two-component system is a key factor in the development of daptomycin resistance in CoNS.
- Mechanisms of daptomycin resistance in CoNS may differ from those in Staphylococcus aureus.
- WalKR mutations represent a shared mechanism of antibiotic resistance across staphylococcal species.
- CoNS are significant contributors to the evolving landscape of daptomycin resistance.
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