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Crystal Structures of Fumarate Hydratases from Leishmania major in a Complex with Inhibitor 2-Thiomalate
Patricia R Feliciano1,2,3,4, Catherine L Drennan1,2,3, Maria Cristina Nonato4
1Howard Hughes Medical Institute , Massachusetts Institute of Technology , Cambridge , Massachusetts 02139 , United States.
Abstract:
Leishmaniases affect the poorest people on earth and have no effective drug therapy. Here, we present the crystal structure of the mitochondrial isoform of class I fumarate hydratase (FH) from Leishmania major and compare it to the previously determined cytosolic Leishmania major isoform. We further describe the mechanism of action of the first class-specific FH inhibitor, 2-thiomalate, through X-ray crystallography and inhibition assays. Our crystal structures of both FH isoforms with inhibitor bound at 2.05 Å resolution and 1.60 Å resolution show high structural similarity. These structures further reveal that the selectivity of 2-thiomalate for class I FHs is due to direct coordination of the inhibitor to the unique Fe of the catalytic [4Fe-4S] cluster that is found in class I parasitic FHs but is absent from class II human FH. These studies provide the structural scaffold in order to exploit class I FHs as potential drug targets against leishmaniases as well as Chagas diseases, sleeping sickness, and malaria.
Insights
Researchers elucidated the structure of parasitic fumarate hydratase (FH) and its inhibitor, revealing a unique iron cluster crucial for targeting leishmaniasis and other parasitic diseases.
Area of Science:
- Biochemistry
- Structural Biology
- Parasitology
Background:
- Leishmaniases are devastating neglected tropical diseases with limited therapeutic options.
- Fumarate hydratase (FH) is a key metabolic enzyme in parasites, making it a potential drug target.
Purpose of the Study:
- To determine the crystal structure of the mitochondrial class I fumarate hydratase (FH) from Leishmania major.
- To elucidate the mechanism of action of the first class-specific FH inhibitor, 2-thiomalate.
- To provide a structural basis for developing new anti-parasitic drugs.
Main Methods:
- X-ray crystallography was employed to determine the structures of Leishmania major FH isoforms.
- Inhibition assays were performed to evaluate the efficacy of 2-thiomalate.
- Structural comparison between parasitic and human FH isoforms.
Main Results:
- High structural similarity was observed between the mitochondrial and cytosolic Leishmania major FH isoforms.
- The crystal structures revealed that 2-thiomalate selectively targets class I FH by coordinating to a unique iron-sulfur cluster.
- This unique cluster is present in parasitic FH but absent in human FH, explaining the drug's specificity.
Conclusions:
- Class I fumarate hydratase is a promising drug target for leishmaniases and other parasitic diseases like Chagas disease, sleeping sickness, and malaria.
- The structural insights into 2-thiomalate binding provide a foundation for designing novel, selective FH inhibitors.
- Targeting parasitic FH offers a potential strategy to combat neglected tropical diseases.
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