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Updated: Jan 30, 2026

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
Published on: May 10, 2022
BAP1 complex promotes transcription by opposing PRC1-mediated H2A ubiquitylation
Antoine Campagne1,2, Ming-Kang Lee1,2, Dina Zielinski1,2,3
1Institut Curie, Paris Sciences et Lettres Research University, Sorbonne University, 75005, Paris, France.
The BAP1 protein complex (BAP1.com) unexpectedly activates gene expression, not silencing. It protects active genes from Polycomb Repressive Complex 1, revealing a new role for BAP1 in transcriptional regulation.
Area of Science:
- Molecular Biology
- Epigenetics
- Cancer Biology
Background:
- The Calypso-ASX complex in Drosophila deubiquitinates H2A and functions in Polycomb-mediated transcriptional silencing.
- Mammalian homologs BAP1 and ASXL1/2/3 are frequently mutated in cancers, but their roles are not fully understood.
Purpose of the Study:
- To elucidate the precise functions of the mammalian BAP1 and ASXL proteins.
- To investigate the role of BAP1 in transcriptional regulation and its association with the Polycomb machinery.
Main Methods:
- Utilized CRISPR/Cas9 technology to generate isogenic cell lines.
- Employed an integrative approach to study BAP1 complex formation and function.
- Investigated the mechanism of BAP1.com-mediated transcriptional regulation.
Main Results:
- Discovered a novel role for BAP1 in gene activation, distinct from Polycomb-mediated silencing.
- Demonstrated that BAP1 function requires an enzymatically active BAP1-associated core complex (BAP1.com) with ASXL proteins.
- Showed that BAP1.com safeguards transcriptionally active genes against Polycomb Repressive Complex 1 (PRC1) silencing.
Conclusions:
- BAP1, as part of the BAP1.com complex, functions in gene activation rather than silencing.
- BAP1.com acts as a crucial regulator by protecting active genes from repression by PRC1.
- These findings reveal a new paradigm for BAP1 function in transcriptional control and cancer biology.
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