Related Experiment Video
Updated: Jan 30, 2026

Luminescence Resonance Energy Transfer to Study Conformational Changes in Membrane Proteins Expressed in Mammalian Cells
Published on: September 16, 2014
PEPCONF, a diverse data set of peptide conformational energies
Viki Kumar Prasad1, Alberto Otero-de-la-Roza2, Gino A DiLabio1,3
1Department of Chemistry, University of British Columbia, Okanagan, 3247 University Way, Kelowna, British Columbia, V1V 1V7, Canada.
Abstract:
We present an extensive and diverse database of peptide conformational energies. Our database contains five different classes of model geometries: dipeptides, tripeptides, and disulfide-bridged, bioactive, and cyclic peptides. In total, the database consists of 3775 conformational energy data points and 4530 conformer geometries. All the reference energies have been calculated at the LC-ωPBE-XDM/aug-cc-pVTZ level of theory, which is shown to yield conformational energies with an accuracy in the order of tenths of a kcal/mol when compared to complete-basis-set coupled-cluster reference data. The peptide conformational data set (PEPCONF) is presented as a high-quality reference set for the development and benchmarking of molecular-mechanics and semi-empirical electronic structure methods, which are the most commonly used techniques in the modeling of medium to large proteins.
Related Concept Videos
Conformity
Peptide Bonds
Design Example: Setting a Curve Using Design Data
Conformations of Butane
What is Energy?
Free Energy

