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Data electronically extracted from the electronic health record require validation.

Lisa M Scheid1,2, L Steven Brown3, Christopher Clark3

  • 1Department of Pediatrics, University of Texas Health Science Center at Houston, Houston, TX, USA.

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|January 26, 2019
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Summary
This summary is machine-generated.

Electronic health record data extraction requires validation. Poor agreement for categorical variables like hypoglycemia highlights the need for built-in data checks to ensure accuracy.

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Area of Science:

  • Health Informatics
  • Clinical Data Management
  • Neonatal Research

Background:

  • Electronic health records (EHRs) offer vast data but require accurate extraction for research.
  • Automated data extraction from EHRs can introduce errors, impacting study validity.
  • Neonatal hypoglycemia research relies on precise data for effective analysis.

Purpose of the Study:

  • To identify sources of error in electronically extracted data from EHRs.
  • To assess the accuracy of extracted categorical and continuous variables for neonatal hypoglycemia research.
  • To evaluate the effectiveness of validation procedures in improving data quality.

Main Methods:

  • Electronically extracted data for 100 neonates with early-onset hypoglycemia were analyzed.
  • Extraction language was developed by an IT specialist.
  • Data validation involved blinded manual chart review, using Kappa coefficients for categorical and percent validity for continuous variables.

Main Results:

  • 35% of categorical variables achieved acceptable agreement (Kappa ≥ 0.81); 22% showed fair-slight agreement (Kappa < 0.40).
  • The variable "hypoglycemia" demonstrated poor agreement (Kappa = 0.16).
  • Continuous variables showed higher validity (≥ 94%); improvements were noted after refining extraction language, though "hypoglycemia" remained problematic.

Conclusions:

  • Data extraction without validation, particularly for categorical variables (e.g., using International Classification of Diseases-9 codes), often leads to inaccurate data.
  • Implementing built-in validation processes is crucial for ensuring the reliability of electronically extracted EHR data.
  • Specific variables, such as "hypoglycemia," may require tailored validation strategies to overcome extraction challenges.