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Updated: Jan 30, 2026

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
Repurposing cabozantinib to GISTs: Overcoming multiple imatinib-resistant cKIT mutations including gatekeeper and
Tingting Lu1, Cheng Chen2, Aoli Wang3
1High Magnetic Field Laboratory, Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui, 230031, PR China; University of Science and Technology of China, Hefei, Anhui, 230026, PR China; Anhui University of Chinese Medicine, Hefei, Anhui, 230012, PR China.
Abstract:
Despite of the great success of imatinib as the first-line treatment for GISTs, the majority of patients will develop drug-acquired resistance due to secondary mutations in the cKIT kinase. Sunitinib and regorafenib have been approved as the second and third line therapies to overcome some of these drug-resistance mutations; however, their limited clinical response, toxicity and resistance of the activation loop mutants still makes new therapies bearing different cKIT mutants activity spectrum profile highly demanded. Through a drug repositioning approach, we found that cabozantinib exhibited higher potency than imatinib against primary gain-of-function mutations of cKIT. Moreover, cabozantinib was able to overcome cKIT gatekeeper T670I mutation and the activation loop mutations that are resistant to imatinib or sunitinib. Cabozantinib demonstrated good efficacy in vitro and in vivo in the cKIT mutant-driven preclinical models of GISTs while displaying a long-lasting effect after treatment withdrawal. Furthermore, it also exhibited dose-dependent anti-proliferative efficacy in the GIST patient derived primary cells. Considering clinical safety and PK profile of cabozantinib, this report provides the basis for the future clinical applications of cabozantinib as an alternative anti-GISTs therapy in precision medicine.
Insights
Cabozantinib shows promise in treating gastrointestinal stromal tumors (GISTs) by overcoming drug resistance mutations in the cKIT kinase. This repositioned drug offers a potential new precision medicine therapy for GIST patients.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Imatinib is a successful first-line treatment for gastrointestinal stromal tumors (GISTs), but acquired resistance frequently develops due to secondary cKIT kinase mutations.
- Sunitinib and regorafenib are approved for later lines of therapy but have limitations in clinical response, toxicity, and activity against certain resistance mutations.
- There is a significant need for novel therapies effective against a broader spectrum of cKIT mutations in GISTs.
Purpose of the Study:
- To investigate the efficacy of cabozantinib, a drug repositioning candidate, against various cKIT mutations driving GIST.
- To evaluate cabozantinib's potential to overcome resistance to existing therapies like imatinib and sunitinib.
- To provide a preclinical basis for the clinical application of cabozantinib in GIST precision medicine.
Main Methods:
- Drug repositioning approach to identify novel GIST therapies.
- In vitro and in vivo preclinical models using cKIT mutant-driven GIST.
- Assessment of cabozantinib's potency against primary and resistance cKIT mutations, including gatekeeper and activation loop mutants.
- Evaluation of anti-proliferative effects in patient-derived GIST primary cells.
Main Results:
- Cabozantinib demonstrated superior potency compared to imatinib against primary cKIT gain-of-function mutations.
- Cabozantinib effectively overcame imatinib- and sunitinib-resistant cKIT mutations, including the T670I gatekeeper mutation and activation loop mutants.
- Significant in vitro and in vivo efficacy was observed in preclinical GIST models, with a sustained effect post-treatment.
- Dose-dependent anti-proliferative activity was confirmed in primary GIST cells.
Conclusions:
- Cabozantinib exhibits potent activity against a wide range of cKIT mutations relevant to GIST, including those conferring resistance to current therapies.
- The drug demonstrated promising efficacy and a long-lasting effect in preclinical GIST models.
- Cabozantinib's established clinical safety and pharmacokinetic profile support its consideration as an alternative GIST therapy within precision medicine strategies.
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