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Published on: December 28, 2021
Normalized averaged range (nAR), a robust quantification method for MPIO-content
Maarten Naeyaert1, Dimitri Roose1, Zhenhua Mai1
1Bio-Imaging Lab, University of Antwerp, Universiteitsplein 1, 2610 Wilrijk, Antwerp, Belgium.
Abstract:
Micron-sized paramagnetic iron oxide particles (MPIO) are commonly used as contrast agents in magnetic resonance imaging (MRI) that produce negative contrast enhancement, i.e. darkening, on T2*-weighted images. However, estimation and quantification of MPIO in vivo is still challenging. This limitation mainly arises from smearing and displacement of the negative contrast of the MPIO, so-called blooming, potentially leading to false-positive detection. Further, the bias field induced by the MR coils also hinders visualization and quantification of the MPIO. To mitigate these drawbacks, a positive contrast image can be generated, for example by using a frequency offset technique, which can significantly improve the accuracy of quantification methods. In this research, we introduce the normalized average range (nAR) as a new way to quantify the relative MPIO content within a study. The method compares the average value of test ROIs to that of a control ROI in range filtered images. The nAR can be used on both positive and negative contrast images. The nAR was tested on agar phantoms containing various MPIO concentrations, and on a rostral migration model for MPIO labeled stem cells in mice. The amount of MPIO was quantified for biased and unbiased data, and both for positive and negative contrast images. In addition, the presence of MPIOs in the olfactory bulb was verified by histology. The results show the nAR can indicate the presence and relative content of MPIO for both negative and positive images. However, the nAR showed slightly higher sensitivity in optimized positive contrast images compared to negative contrast images. In all cases, the bias field played a minor role in the quantification, making debiasing less of a concern. The dependency of the nAR values on the MPIO content in the ROI was further validated histologically. Thus, the nAR provides a robust and reliable tool for quantification of MPIO in mice.
Insights
Quantifying micron-sized paramagnetic iron oxide particles (MPIO) in vivo is challenging. A new method, normalized average range (nAR), accurately quantifies MPIO in MRI images, improving accuracy for both positive and negative contrast imaging.
Area of Science:
- Biomedical Imaging
- Nanotechnology
- Medical Physics
Background:
- Micron-sized paramagnetic iron oxide particles (MPIO) are vital MRI contrast agents, but their in vivo quantification is hindered by blooming artifacts and bias fields.
- Existing methods struggle with accuracy due to signal distortions, limiting reliable MPIO detection and measurement.
Purpose of the Study:
- To introduce and validate a novel quantification method, the normalized average range (nAR), for MPIO in magnetic resonance imaging (MRI).
- To assess the efficacy of nAR across different contrast types (positive and negative) and under varying imaging conditions (biased and unbiased).
Main Methods:
- Developed the normalized average range (nAR) method, comparing average values in test regions of interest (ROIs) to a control ROI in range-filtered images.
- Applied nAR to agar phantoms with varying MPIO concentrations and to a mouse model tracking MPIO-labeled stem cells.
- Quantified MPIO in both positive and negative contrast MRI images, with and without bias field correction, and validated findings with histology.
Main Results:
- The nAR method reliably indicates the presence and relative content of MPIO in both negative and positive contrast MRI images.
- Optimized positive contrast images demonstrated slightly higher sensitivity for nAR compared to negative contrast images.
- The bias field had a minimal impact on MPIO quantification using nAR, reducing the need for extensive debiasing procedures.
- Histological analysis confirmed the correlation between nAR values and MPIO content.
Conclusions:
- The normalized average range (nAR) offers a robust and reliable tool for quantifying MPIO content in vivo, particularly in mouse models.
- The nAR method enhances accuracy and simplifies MPIO quantification, overcoming limitations of traditional approaches.
- The technique's effectiveness across different contrast types and minimal sensitivity to bias fields make it a versatile solution for MPIO research.
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