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A natural language processing algorithm to extract characteristics of subdural hematoma from head CT reports
Peter Pruitt1,2, Andrew Naidech3,4, Jonathan Van Ornam5,6,7
1Department of Emergency Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA. peter.pruitt@northwestern.edu.
A new natural language processing (NLP) algorithm accurately extracts key data from subdural hematoma (SDH) computed tomography (CT) reports. This tool can help identify important radiographic findings in electronic health records for better patient outcomes.
Area of Science:
- Radiology
- Natural Language Processing
- Medical Informatics
Background:
- Subdural hematoma (SDH) is a common traumatic intracranial hemorrhage.
- Radiographic features of SDH predict patient complications and outcomes.
- Extracting structured data from clinical reports is challenging.
Purpose of the Study:
- To develop and evaluate a natural language processing (NLP) algorithm.
- To extract structured data from cranial computed tomography (CT) scan reports for patients with SDH.
- To assess the accuracy of the NLP algorithm in identifying key SDH characteristics.
Main Methods:
- Collected CT scan reports for patients with SDH from a single center.
- Physicians manually coded reports for SDH number, midline shift, SDH thickness, and SDH side.
- Developed an NLP pipeline using a pattern-matching approach and Apache Unstructured Information Management Architecture.
- Measured algorithm performance against physician-coded data.
Main Results:
- The NLP algorithm achieved high accuracy in extracting data.
- Accuracy for side of largest SDH was 0.84.
- Accuracy for thickness of largest SDH was 0.88.
- Accuracy for size of midline shift was 0.92.
Conclusions:
- A NLP algorithm can accurately structure key data from head CT reports.
- This NLP tool can identify important radiographic findings from electronic health records.
- The algorithm has the potential to support clinical decision-making.
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