Protein informatics combined with multiple data sources enriches the clinical characterization of novel TRPV4 variant

Stephanie L Hines1,2,3, John E Richter1, Ahmed N Mohammad1

  • 1Department of Clinical Genomics, Mayo Clinic, Jacksonville, Florida.

Abstract

Insights

A novel TRPV4 gene variant (c.2401A>G) was identified in a family with skeletal dysplasia. Molecular studies confirmed its pathogenicity, highlighting complex genotype-phenotype correlations in TRPV4-related disorders.

Area of Science:

  • Genetics and Molecular Biology
  • Biophysics
  • Clinical Medicine

Background:

  • Transient receptor potential cation channel subfamily V member 4 (TRPV4) is a Ca2+-permeable ion channel activated by various stimuli.
  • Pathogenic variants in TRPV4 are linked to skeletal dysplasias and neuromuscular disorders, but genotype-phenotype correlations are often unclear.
  • TRPV4 is expressed in osteoclasts, chondrocytes, and sensory neurons, indicating its diverse physiological roles.

Observation:

  • A novel TRPV4 variant, c.2401A>G (p.K801E), was identified in a proband and her family members.
  • The proband, her father, and her daughter presented with overlapping symptoms consistent with TRPV4-associated skeletal dysplasia.
  • Genomic exome analysis and clinical studies were performed to investigate the variant's impact.

Findings:

  • Protein informatics and molecular modeling confirmed the pathogenicity of the novel c.2401A>G TRPV4 variant.
  • The identified variant demonstrated complex genotype-phenotype correlations within the affected family.
  • Comparative analysis of the proband's phenotype with known TRPV4-associated skeletal dysplasias was conducted.

Implications:

  • This study provides a comprehensive perspective on the disease and prognosis associated with the unique TRPV4 variant.
  • Understanding the pathogenicity of novel TRPV4 variants is crucial for accurate diagnosis and genetic counseling.
  • Further research into TRPV4 variants can elucidate the pathogenesis of skeletal dysplasias and neuromuscular disorders.

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