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A scalable discrete-time survival model for neural networks
Michael F Gensheimer1, Balasubramanian Narasimhan2
1Department of Radiation Oncology, Stanford University, Stanford, CA, United States of America.
Nnet-survival is a novel neural network model for medical prediction using survival data. It efficiently handles large datasets and generates survival curves, outperforming existing models like Cox-nnet and Deepsurv.
Area of Science:
- Medical prediction
- Machine learning in healthcare
- Survival analysis
Background:
- Neural networks are increasingly used for medical prediction.
- Survival data, including follow-up time and event indicators, is crucial for accurate modeling.
- Existing models may not fully leverage survival data, leading to information loss.
Purpose of the Study:
- Introduce Nnet-survival, a discrete-time neural network model for survival data.
- Enable efficient training on large datasets and generation of predicted survival curves.
- Provide a flexible model where hazard rates vary with follow-up time.
Main Methods:
- Developed a discrete-time survival model integrated with neural networks (Nnet-survival).
- Employed maximum likelihood estimation with mini-batch stochastic gradient descent (SGD) for training.
- Implemented the model in the Keras deep learning framework.
Main Results:
- Nnet-survival demonstrated strong performance on both simulated and real-world medical data.
- The model showed rapid convergence due to SGD, suitable for large datasets.
- Compared favorably against established models such as Cox-nnet and Deepsurv.
Conclusions:
- Nnet-survival offers a flexible and efficient approach for medical prediction using survival data.
- The model's ability to handle time-varying hazards enhances predictive accuracy.
- Availability of source code facilitates adoption and further research in deep learning for survival analysis.
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