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Related Concept Videos

PCR01:32

PCR

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Overview
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Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
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Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
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The conversion of alkenes to macromolecules called polymers is a reaction of high commercial importance. The structure of the polymer is defined by a repeating unit, while the terminal groups are considered insignificant. The average degree of polymerization represents the number of repeating units in the polymer molecule and is denoted by the subscript n.
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RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
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Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
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Evaluation of a Universal Nested Reverse Transcription Polymerase Chain Reaction for the Detection of Lyssaviruses
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Nested Polymerase Chain Reaction (PCR).

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    Nested polymerase chain reaction (PCR) enhances DNA amplification sensitivity and specificity. This method uses two sequential reactions with different primer pairs to amplify target DNA, ideal for low-abundance targets.

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    Area of Science:

    • Molecular Biology
    • Genetics

    Background:

    • Polymerase chain reaction (PCR) is a fundamental technique for DNA amplification.
    • Increasing PCR sensitivity and specificity is crucial for detecting low-abundance targets or distinguishing between similar sequences.

    Purpose of the Study:

    • To describe the principles and applications of nested polymerase chain reaction (PCR).
    • To highlight nested PCR's advantages in enhancing sensitivity and specificity over conventional PCR.

    Main Methods:

    • Nested PCR involves two sequential amplification steps.
    • The first step uses an outer pair of primers, and its product serves as the template for the second step.
    • The second step uses an inner pair of primers, located within the first pair's binding sites.

    Main Results:

    • Nested PCR significantly increases sensitivity, allowing amplification of targets present at very low concentrations.
    • The use of two distinct primer sets enhances specificity by requiring binding at two separate regions.
    • This method is effective for amplifying specific gene family members or low-abundance mRNA targets.

    Conclusions:

    • Nested PCR is a powerful technique for improving the sensitivity and specificity of DNA amplification.
    • It is particularly useful in molecular diagnostics and research involving complex or dilute DNA samples.
    • Successful implementation requires prior knowledge of the target DNA sequence.