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A fluorinated indole-based MDM2 antagonist selectively inhibits the growth of p53wt osteosarcoma cells
Lukasz Skalniak1, Aleksandra Twarda-Clapa1, Constantinos G Neochoritis2
1Faculty of Chemistry, Jagiellonian University, Krakow, Poland.
Abstract:
The p53 protein is engaged in the repair of DNA mutations and elimination of heavily damaged cells, providing anticancer protection. Dysregulation of p53 activity is a crucial step in carcinogenesis. This dysregulation is often caused by the overexpression of negative regulators of p53, among which MDM2 is the most prominent one. Antagonizing MDM2 with small molecules restores the activity of p53 in p53 wild-type (p53wt ) cells and thus provides positive outcomes in the treatment of p53wt cancers. Previously, we have reported the discovery of a panel of fluoro-substituted indole-based antagonists of MDM2. Here, we demonstrate the biological activity and stereoselectivity of the most active compound from this series. Both enantiomers of the esterified form of the compound, as well as its corresponding carboxylic acids, were found active in fluorescence polarization (FP) assay, nuclear magnetic resonance (NMR) and microscale thermophoresis (MST) assay, with Ki and KD values around 1 μm. From these four compounds, the esterified enantiomer (R)-5a was active in cells, which was evidenced by the increase of p53 levels, the induced expression of p53-target genes (CDKN1A and MDM2), the selective induction of cell cycle arrest, and selective growth inhibition of p53wt U-2 OS and SJSA-1 compared to p53del SAOS-2 cells. The analysis of the crystal structure of human MDM2 in complex with the compound (R)-6a (carboxylic acid of the active (R)-5a compound) revealed the classical three-finger binding mode. Altogether, our data demonstrate the activity of the compound and provide the structural basis for further structure optimization.
Insights
Researchers developed novel MDM2 antagonists to restore p53 protein function, offering a promising strategy for treating wild-type p53 cancers. This study highlights the biological activity and structural basis of a potent indole-based compound for anticancer therapy.
Area of Science:
- Medicinal Chemistry
- Molecular Biology
- Structural Biology
Background:
- The p53 protein is a critical tumor suppressor involved in DNA repair and cell cycle regulation.
- Dysregulation of p53, often due to MDM2 overexpression, is a key event in cancer development.
- Targeting MDM2 to restore p53 activity is a therapeutic strategy for p53 wild-type cancers.
Purpose of the Study:
- To evaluate the biological activity and stereoselectivity of a novel fluoro-substituted indole-based MDM2 antagonist.
- To investigate the compound's mechanism of action in cancer cells.
- To elucidate the structural basis of MDM2-antagonist interaction.
Main Methods:
- Fluorescence polarization (FP), nuclear magnetic resonance (NMR), and microscale thermophoresis (MST) assays were used to assess binding affinity.
- Cellular assays measured p53 levels, p53-target gene expression (CDKN1A, MDM2), cell cycle arrest, and cell growth inhibition.
- X-ray crystallography was employed to determine the binding mode of the compound to MDM2.
Main Results:
- Both enantiomers and corresponding carboxylic acids of the esterified compound showed binding to MDM2 with Ki/KD values around 1 μm.
- The (R)-enantiomer ester (R)-5a demonstrated cellular activity, increasing p53 levels and inducing target gene expression.
- Selective cell cycle arrest and growth inhibition were observed in p53 wild-type cancer cells, with structural analysis revealing a classical binding mode.
Conclusions:
- The study validates the anticancer potential of the novel indole-based MDM2 antagonist.
- The compound exhibits stereoselective biological activity and a well-defined binding interaction with MDM2.
- These findings provide a foundation for further optimization of MDM2 inhibitors for cancer therapy.
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