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Updated: Jan 29, 2026

The Diffusion of Passive Tracers in Laminar Shear Flow
Published on: May 1, 2018
Non-Gaussian, non-ergodic, and non-Fickian diffusion of tracers in mucin hydrogels
Andrey G Cherstvy1, Samudrajit Thapa, Caroline E Wagner
1Institute for Physics & Astronomy, University of Potsdam, 14476 Potsdam-Golm, Germany. a.cherstvy@gmail.com samudrajit11@gmail.com rmetzler@uni-potsdam.de.
Abstract:
Native mucus is polymer-based soft-matter material of paramount biological importance. How non-Gaussian and non-ergodic is the diffusive spreading of pathogens in mucus? We study the passive, thermally driven motion of micron-sized tracers in hydrogels of mucins, the main polymeric component of mucus. We report the results of the Bayesian analysis for ranking several diffusion models for a set of tracer trajectories [C. E. Wagner et al., Biomacromolecules, 2017, 18, 3654]. The models with "diffusing diffusivity", fractional and standard Brownian motion are used. The likelihood functions and evidences of each model are computed, ranking the significance of each model for individual traces. We find that viscoelastic anomalous diffusion is often most probable, followed by Brownian motion, while the model with a diffusing diffusion coefficient is only realised rarely. Our analysis also clarifies the distribution of time-averaged displacements, correlations of scaling exponents and diffusion coefficients, and the degree of non-Gaussianity of displacements at varying pH levels. Weak ergodicity breaking is also quantified. We conclude that-consistent with the original study-diffusion of tracers in the mucin gels is most non-Gaussian and non-ergodic at low pH that corresponds to the most heterogeneous networks. Using the Bayesian approach with the nested-sampling algorithm, together with the quantitative analysis of multiple statistical measures, we report new insights into possible physical mechanisms of diffusion in mucin gels.
Insights
Pathogen diffusion in mucus, a polymer soft-matter, is often viscoelastic anomalous diffusion, not simple Brownian motion. This behavior, especially non-Gaussian and non-ergodic, is most pronounced in low pH mucin gels due to network heterogeneity.
Area of Science:
- Soft-matter physics
- Biophysics
- Polymer science
Background:
- Native mucus is a crucial biopolymer-based soft-matter material.
- Understanding pathogen diffusion dynamics within mucus is vital for biological and medical applications.
- Mucus structure, primarily composed of mucins, significantly influences particle transport.
Purpose of the Study:
- To investigate the non-Gaussian and non-ergodic nature of pathogen diffusion in mucus.
- To analyze tracer motion in mucin hydrogels using advanced statistical methods.
- To compare the efficacy of different diffusion models, including Brownian motion and viscoelastic anomalous diffusion.
Main Methods:
- Studied passive, thermally driven motion of micron-sized tracers in mucin hydrogels.
- Employed Bayesian analysis with a nested-sampling algorithm to rank diffusion models.
- Analyzed tracer trajectories using models such as fractional Brownian motion and standard Brownian motion.
Main Results:
- Viscoelastic anomalous diffusion was frequently the most probable model for tracer movement.
- Brownian motion was the second most likely model, while diffusing diffusivity was rarely observed.
- Diffusion exhibited increased non-Gaussianity and non-ergodicity at lower pH, correlating with more heterogeneous mucin networks.
Conclusions:
- The diffusion of tracers in mucin gels is best described by viscoelastic anomalous diffusion, highlighting complex dynamics.
- Low pH conditions lead to the most significant deviations from simple diffusion, indicating network-dependent transport.
- The study provides new insights into the physical mechanisms governing diffusion in mucin gels using a robust Bayesian framework.
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