Datasets for genome assembly of six underutilized Indonesian fruits
Related Experiment Video
Updated: Jan 29, 2026

Isolation and Biophysical Study of Fruit Cuticles
Published on: March 30, 2012
Deden Derajat Matra1, Arya Widura Ritonga1, Azis Natawijaya2
1Department of Agronomy and Horticulture, Faculty of Agriculture, Bogor Agricultural University, Indonesia.
Abstract:
Indonesia has a high genetic diversity of tropical fruits. However, studies on genomics are still very limited. In this data article, six underutilized Indonesian fruits were analyzed for the estimated genome size and partial data of genome assembly including Artocarpus nangkadak (Artocarpus heterophyllus x Artocarpus integer), Salacca sumatrana, Flacourtia inermis, Lansium domesticum, Pometia pinnata, and Syzygium samarangense. These genome data may be used to construct molecular markers for plant systematics and breeding program of these species. Our genome data were sequenced paired-end libraries using BGISeq-500 and generated approximately 5 Gb of bases per species. The raw sequences have been deposited in the DNA Data Bank of Japan (DDBJ) under the DDBJ BioProject umbrella with accession number PRJDB7265 and to the DDBJ Read Archive for each species following Artocarpus nangkadak (DRA007398), Salacca sumatrana (DRA007394), Flacourtia inermis (DRA007395), Lansium domesticum (DRA007393), Pometia pinnata (DRA007396), Syzygium samarangense (DRA007397).
More Related Videos
04:21Author Spotlight: Sieving Fruit Pulp to Detect Immature Tephritid Fruit Flies in the Field
Published on: July 28, 2023
12:08Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies
Published on: August 20, 2021
Related Concept Videos
Genome Annotation and Assembly
Fruit Development, Structure, and Function
Genomics
Genomic Imprinting and Inheritance
The expression of some genes depends on which parent passed the gene to the offspring, through a phenomenon known as...
Protein Complex Assembly
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Genome Size and the Evolution of New Genes