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RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
Long Non-coding RNA CDKN2B Antisense RNA 1 Gene Contributes to Paclitaxel Resistance in Endometrial Carcinoma
Chao Shang1, Cheng N Ao2, Chi C Cheong2
1Department of Neurobiology, School of Life Science, China Medical University, Shenyang, China.
Abstract:
Endometrial cancer (EC) is the most common malignancy of the female reproductive tract. In this study, we clarified the clinical significance of CDKN2B antisense RNA 1 (CDKN2B-AS) gene, and its effects on paclitaxel sensitivity in EC. Firstly, CDKN2B-AS gene was highly expressed in EC tissues and cell lines. The high-expression of CDKN2B-AS gene was associated with high pathological grade and low paclitaxel sensitivity of EC tissues. Knockdown of CDKN2B-AS gene sensitized Ishikawa/PA and HEC1A/PA cells to paclitaxel, and promoted paclitaxel-induced cytotoxicity. Secondly, the low-expression of miR-125a-5p was closely associated with low paclitaxel sensitivity of EC cells, and up-regulation of miR-125a-5p could increase paclitaxel sensitivity of Ishikawa/PA and HEC1A/PA cells. MiR-125a-5p also mediated the suppressive effects of knockdown of CDKN2B-AS on paclitaxel resistance in EC cells. Thirdly, B-cell lymphoma-2 (Bcl2) and Multidrug Resistance-Associated Protein 4 (MRP4) genes were target genes of miR-125a-5p, which modulated paclitaxel resistance of Ishikawa/PA and HEC1A/PA cells through targeted silencing Bcl2 and MRP4. In conclusion, high-expression of CDKN2B-AS is associated with a poor response to paclitaxel of EC patients, and knockdown of CDKN2B-AS inhibits paclitaxel resistance through miR-125a-5p-Bcl2/MRP4 pathway in EC patients. Our findings help elucidate the molecular mechanisms of chemoresistance in EC patients.
Insights
High expression of CDKN2B antisense RNA 1 (CDKN2B-AS) in endometrial cancer (EC) correlates with poor paclitaxel sensitivity. Knocking down CDKN2B-AS enhances chemotherapy response by targeting the miR-125a-5p/Bcl2/MRP4 pathway.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Endometrial cancer (EC) is the most common gynecologic malignancy.
- Paclitaxel is a key chemotherapy agent for EC treatment.
- Understanding chemoresistance mechanisms is crucial for improving patient outcomes.
Purpose of the Study:
- To investigate the clinical significance of CDKN2B antisense RNA 1 (CDKN2B-AS) in EC.
- To elucidate the role of CDKN2B-AS in paclitaxel sensitivity and chemoresistance.
- To explore the underlying molecular pathways involving miR-125a-5p, Bcl2, and MRP4.
Main Methods:
- Gene expression analysis in EC tissues and cell lines.
- In vitro experiments involving gene knockdown and upregulation.
- Assessment of cell sensitivity to paclitaxel and cytotoxicity.
- Analysis of gene and microRNA interactions (e.g., targeting relationships).
Main Results:
- CDKN2B-AS was highly expressed in EC tissues and associated with poor paclitaxel sensitivity.
- Knockdown of CDKN2B-AS resensitized EC cells to paclitaxel and increased cytotoxicity.
- Low miR-125a-5p expression correlated with paclitaxel resistance; its upregulation enhanced sensitivity.
- CDKN2B-AS knockdown's effect was mediated by miR-125a-5p, which targets Bcl2 and MRP4.
Conclusions:
- High CDKN2B-AS expression indicates a poor response to paclitaxel in EC patients.
- CDKN2B-AS knockdown inhibits paclitaxel resistance via the miR-125a-5p-Bcl2/MRP4 pathway.
- This study elucidates molecular mechanisms of chemoresistance in EC, offering potential therapeutic targets.
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