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Updated: Jan 29, 2026

Measuring Diurnal Rhythms in Autophagic and Proteasomal Flux
Published on: September 17, 2019
Two mechanisms involving the autophagic and proteasomal pathways process the metastasis suppressor protein, N-myc
Sumit Sahni1, Kyung Chan Park1, Zaklina Kovacevic1
1Molecular Pharmacology and Pathology Program, Department of Pathology and Bosch Institute, Medical Foundation Building (K25), University of Sydney, Sydney, New South Wales 2006, Australia.
Abstract:
N-myc downstream regulated gene 1 (NDRG1) is an intriguing metastasis suppressor protein, which plays an important role in suppressing multiple oncogenic signaling pathways. Interestingly, multiple isoforms of NDRG1 have been identified, although the molecular mechanisms involved in their generation remains elusive. Herein, we demonstrate the role of two mechanisms involving autophagic and proteasomal machinery as part of an intricate system to generate different NDRG1 isoforms. Examining multiple pancreatic cancer cell-types using immunoblotting demonstrated three major isoforms of NDRG1 at approximately 41-, 46- and 47-kDa. The top NDRG1 band at 47-kDa was shown to be processed by the proteasome, followed by autophagic metabolism of the middle NDRG1 band at 46-kDa. The role of the proteasomal and autophagic pathways in NDRG1 processing was further confirmed by co-localization analysis of confocal images using PSMD9 and LC3 as classical markers of these respective pathways. All NDRG1 isoforms were demonstrated to be, at least in part, phosphorylated forms of the protein. Inhibition of two well-characterized upstream kinases of NDRG1, namely GSK3β and SGK1, resulted in decreased levels of the top NDRG1 band. Studies demonstrated that inhibition of GSK3β decreased levels of the top 47-kDa NDRG1 band, independent of its kinase activity, and this effect was not mediated via the proteasomal pathway. In contrast, the decrease in the top NDRG1 band at 47-kDa after SGK1 inhibition, was due to suppression of its kinase activity. Overall, these studies elucidated the complex and intricate regulatory pathways involving both proteasomal and autophagic processing of the metastasis suppressor protein, NDRG1.
Insights
The metastasis suppressor N-myc downstream regulated gene 1 (NDRG1) protein isoforms are generated by proteasomal and autophagic pathways. Kinase activity of GSK3β and SGK1 impacts NDRG1 processing and levels.
Area of Science:
- Molecular Biology
- Cancer Research
- Cell Biology
Background:
- N-myc downstream regulated gene 1 (NDRG1) is a key metastasis suppressor.
- Multiple NDRG1 protein isoforms exist, but their generation mechanisms are unclear.
- Understanding NDRG1 isoform regulation is crucial for cancer therapy.
Purpose of the Study:
- To elucidate the molecular mechanisms generating different NDRG1 protein isoforms.
- To investigate the roles of proteasomal and autophagic pathways in NDRG1 processing.
- To examine the impact of upstream kinases (GSK3β and SGK1) on NDRG1 isoforms.
Main Methods:
- Immunoblotting of pancreatic cancer cell lines to identify NDRG1 isoforms.
- Co-localization analysis using PSMD9 and LC3 markers for proteasomal and autophagic pathways.
- Inhibition of GSK3β and SGK1 kinases to assess their effects on NDRG1 levels.
Main Results:
- Three major NDRG1 isoforms (41-, 46-, and 47-kDa) were identified.
- The 47-kDa isoform is proteasomally processed, and the 46-kDa isoform undergoes autophagic metabolism.
- GSK3β and SGK1 inhibition affected NDRG1 isoform levels, with SGK1's kinase activity being crucial.
Conclusions:
- Proteasomal and autophagic pathways intricately regulate NDRG1 isoform generation.
- NDRG1 isoforms are, in part, phosphorylated.
- Upstream kinases GSK3β and SGK1 play distinct roles in modulating NDRG1 processing and levels.
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