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Describing a Transcription Factor Dependent Regulation of the MicroRNA Transcriptome
Published on: June 15, 2016
The transcription factor Duxbl mediates elimination of pre-T cells that fail β-selection
Fabian Klein1, Mladen Mitrovic2, Julien Roux3,4
1Developmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland f.klein@unibas.ch.
Abstract:
T cell development is critically dependent on successful rearrangement of antigen-receptor chains. At the β-selection checkpoint, only cells with a functional rearrangement continue in development. However, how nonselected T cells proceed in their dead-end fate is not clear. We identified low CD27 expression to mark pre-T cells that have failed to rearrange their β-chain. Expression profiling and single-cell transcriptome clustering identified a developmental trajectory through β-selection and revealed specific expression of the transcription factor Duxbl at a stage of high recombination activity before β-selection. Conditional transgenic expression of Duxbl resulted in a developmental block at the DN3-to-DN4 transition due to reduced proliferation and enhanced apoptosis, whereas RNA silencing of Duxbl led to a decrease in apoptosis. Transcriptome analysis linked Duxbl to elevated expression of the apoptosis-inducing Oas/RNaseL pathway. RNaseL deficiency or sustained Bcl2 expression led to a partial rescue of cells in Duxbl transgenic mice. These findings identify Duxbl as a regulator of β-selection by inducing apoptosis in cells with a nonfunctional rearrangement.
Insights
Researchers found that the transcription factor Duxbl marks T cells that fail to rearrange their beta-chain during development. Duxbl induces apoptosis in these non-selected cells, ensuring proper T cell selection.
Area of Science:
- Immunology
- Molecular Biology
- Developmental Biology
Background:
- T cell development requires successful antigen-receptor gene rearrangement.
- The β-selection checkpoint ensures functional T cell receptor (TCR) β-chain rearrangement.
- The fate of T cells failing β-selection remains poorly understood.
Purpose of the Study:
- To investigate the molecular mechanisms governing the fate of T cells that fail β-selection.
- To identify molecular markers and regulators of T cell development at the β-selection checkpoint.
Main Methods:
- Single-cell transcriptome clustering and expression profiling.
- Conditional transgenic mouse models for Duxbl manipulation.
- RNA interference (RNAi) for Duxbl silencing.
- Analysis of apoptosis pathways (Oas/RNaseL, Bcl2).
Main Results:
- Low CD27 expression identifies pre-T cells with failed β-chain rearrangement.
- Transcription factor Duxbl is specifically expressed before β-selection during high recombination activity.
- Duxbl overexpression causes developmental arrest and apoptosis at the DN3-to-DN4 transition.
- Duxbl upregulates the Oas/RNaseL apoptosis pathway; Duxbl silencing reduces apoptosis.
- RNaseL deficiency or Bcl2 overexpression partially rescues Duxbl-induced developmental defects.
Conclusions:
- Duxbl acts as a critical regulator of β-selection.
- Duxbl induces apoptosis in T cells with nonfunctional β-chain rearrangements, ensuring developmental progression.
- The Oas/RNaseL pathway is a key mediator of Duxbl-induced apoptosis during T cell selection.
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