Inter-strain expression of sequence-diverse HET domain genes severely inhibits growth of Aspergillus oryzae
Noriko Mori1, Takuya Katayama1,2, Ryota Saito3
1a Department of Biotechnology , The University of Tokyo , Tokyo , Japan.
Abstract:
In the Pezizomycotina (filamentous ascomycete) species, genes that encode proteins with an HET domain (Pfam: PF06985) are reportedly involved in heterokaryon incompatibility (HI) in which cell death or growth defects are induced after fusion of cells that are genetically incompatible owing to diversities in their nucleotide sequence. HET domain genes are commonly found in Pezizomycotina genomes and are functionally characterized in only a few species. Here, we compared 44 HET domain genes between an incompatible strain pair of Aspergillus oryzae RIB40 and RIB128 and performed inter-strain expression of 37 sequence-diverse genes for mimicking HI. Four HET domain genes were identified to cause severe growth inhibition in a strain- or sequence-specific manner. Furthermore, SNPs responsible for the inhibition of cell growth were identified. This study provides an important insight into the physiological significance of sequence diversity of HET domain genes and their potential functions in HI of A. oryzae.
Insights
Genes with HET domains in filamentous fungi like Aspergillus oryzae are key to heterokaryon incompatibility (HI). Sequence variations in these genes cause growth defects, revealing their physiological importance.
Area of Science:
- Mycology
- Genetics
- Molecular Biology
Background:
- HET domain proteins are involved in heterokaryon incompatibility (HI) in Pezizomycotina, leading to cell death or growth defects upon fusion of genetically dissimilar cells.
- These genes are prevalent in Pezizomycotina genomes but functionally characterized in limited species.
Purpose of the Study:
- To investigate the role of HET domain genes in heterokaryon incompatibility (HI) within Aspergillus oryzae.
- To identify specific HET domain genes and sequence variations responsible for growth inhibition during inter-strain fusion.
Main Methods:
- Comparative analysis of 44 HET domain genes between two incompatible Aspergillus oryzae strains (RIB40 and RIB128).
- Inter-strain expression of 37 sequence-diverse HET domain genes to mimic HI conditions.
- Identification of single nucleotide polymorphisms (SNPs) associated with growth inhibition.
Main Results:
- Four HET domain genes were found to induce severe growth inhibition in a strain- and sequence-specific manner.
- Specific single nucleotide polymorphisms (SNPs) were identified as the cause of this cell growth inhibition.
Conclusions:
- Sequence diversity in HET domain genes significantly impacts heterokaryon incompatibility (HI) in Aspergillus oryzae.
- This study elucidates the physiological significance of HET domain gene sequence variation and their role in HI.
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