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Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Development of Dual and Selective Degraders of Cyclin-Dependent Kinases 4 and 6
Baishan Jiang1, Eric S Wang1, Katherine A Donovan1
1Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Abstract:
Cyclin-dependent kinases 4 and 6 (CDK4/6) are key regulators of the cell cycle, and there are FDA-approved CDK4/6 inhibitors for treating patients with metastatic breast cancer. However, due to conservation of their ATP-binding sites, development of selective agents has remained elusive. Here, we report imide-based degrader molecules capable of degrading both CDK4/6, or selectively degrading either CDK4 or CDK6. We were also able to tune the activity of these molecules against Ikaros (IKZF1) and Aiolos (IKZF3), which are well-established targets of imide-based degraders. We found that in mantle cell lymphoma cell lines, combined IKZF1/3 degradation with dual CDK4/6 degradation produced enhanced anti-proliferative effects compared to CDK4/6 inhibition, CDK4/6 degradation, or IKZF1/3 degradation. In summary, we report here the first compounds capable of inducing selective degradation of CDK4 and CDK6 as tools to pharmacologically dissect their distinct biological functions.
Insights
New imide-based molecules can degrade cyclin-dependent kinases 4 and 6 (CDK4/6), offering selective targeting for cancer research. These compounds show enhanced anti-proliferative effects in mantle cell lymphoma by degrading both CDK4/6 and IKZF1/3 proteins.
Area of Science:
- Molecular Biology
- Oncology
- Drug Discovery
Background:
- Cyclin-dependent kinases 4 and 6 (CDK4/6) are crucial cell cycle regulators.
- Existing FDA-approved CDK4/6 inhibitors treat metastatic breast cancer.
- Selective CDK4/6 targeting is challenging due to conserved ATP-binding sites.
Purpose of the Study:
- To develop novel imide-based degrader molecules targeting CDK4/6.
- To achieve selective degradation of CDK4, CDK6, or both.
- To investigate the therapeutic potential of combined degradation of CDK4/6 and IKZF1/3.
Main Methods:
- Design and synthesis of imide-based small molecules.
- Assessment of degradation activity against CDK4, CDK6, IKZF1, and IKZF3.
- Evaluation of anti-proliferative effects in mantle cell lymphoma cell lines.
Main Results:
- Developed imide-based molecules capable of dual or selective CDK4/6 degradation.
- Demonstrated tunable activity against IKZF1 and IKZF3.
- Observed enhanced anti-proliferative effects in mantle cell lymphoma with combined IKZF1/3 and CDK4/6 degradation.
Conclusions:
- Reported the first compounds for selective CDK4 and CDK6 degradation.
- These molecules serve as tools to study distinct biological functions of CDK4 and CDK6.
- Combined degradation strategy shows promise for enhanced anti-cancer activity.
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