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Updated: Jan 28, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR RS-PCR
Published on: November 4, 2016
Determining the Biofilm Forming Gene Profile of Staphylococcus aureus Clinical Isolates via Multiplex Colony PCR
Mostafa Shahmoradi1, Peyman Faridifar1, Reza Shapouri1
1Department of Microbiology, Zanjan Branch, Islamic Azad University, Zanjan, Iran.
Background:
Among hospitalized patients, Staphylococcus aureus (S. aureus) infections pose a serious health threat. The present study investigated the frequency of biofilm forming genes among clinical isolates S. aureus and their susceptibility to antibiotics.
Methods:
The clinical samples were analyzed via standard biochemical assays for identifying different bacterium, which was then confirmed using the multiplex colony PCR method. Those samples identified as S. aureus were examined for the presence of the cna, fnbA, fnbB and pvl genes. The antibiotic susceptibility of the S. aureus isolates was then tested.
Results:
Using the standard biochemical assay approach, 54 S. aureus strains were identified. However, when using the multiplex PCR method 50 S. aureus strains were identified among the clinical samples. The in vitro biofilm formation assays determined 3 (6%) strains of S. aureus to be strong biofilm forming, 15 (30%) of the isolates were determined to be moderate biofilm forming and, 32 (64%) were determined to be weak biofilm forming. Among the isolated strains, the specific frequencies of the biofilm forming genes were determined to be 31 (62%) for cna, 35 (70%) for fnbA, 13 (26%) for fnbB and 1 (2%) for pvl. In 11 (22%) of the isolated strains fnbA, fnbB and cna genes were all present. All strains were determined to be penicillin, amoxicillin and clavulanic acid resistant.
Conclusion:
Due to the increase of the antibiotic resistance in biofilm producing S. aureus strains, rapid identification of antibiotic resistance can help to eliminate the infection effectively.
Insights
This study found that most Staphylococcus aureus (S. aureus) strains from hospitalized patients form biofilms and are resistant to common antibiotics like penicillin. Identifying these antibiotic resistance genes is crucial for effective treatment.
Area of Science:
- Microbiology
- Infectious Diseases
- Molecular Biology
Background:
- Hospital-acquired Staphylococcus aureus (S. aureus) infections present a significant clinical challenge.
- Understanding the genetic basis of biofilm formation and antibiotic resistance in S. aureus is critical for effective treatment strategies.
Purpose of the Study:
- To determine the prevalence of biofilm-forming genes in clinical S. aureus isolates.
- To assess the antibiotic susceptibility patterns of these S. aureus strains.
Main Methods:
- Clinical samples were analyzed using biochemical assays and confirmed with multiplex PCR for S. aureus identification.
- Biofilm formation capacity was evaluated in vitro.
- Presence of specific genes (cna, fnbA, fnbB, pvl) and antibiotic susceptibility were tested.
Main Results:
- Multiplex PCR identified 50 S. aureus strains; 64% were weak, 30% moderate, and 6% strong biofilm formers.
- Prevalence of biofilm genes: cna (62%), fnbA (70%), fnbB (26%), pvl (2%).
- All isolates were resistant to penicillin, amoxicillin, and clavulanic acid.
Conclusions:
- The high prevalence of biofilm-producing S. aureus strains with significant antibiotic resistance underscores the need for rapid diagnostic methods.
- Effective elimination of S. aureus infections requires timely identification of antibiotic resistance profiles, especially in biofilm-forming strains.
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