An Oxidative Pathway for Microbial Utilization of Methylphosphonic Acid as a Phosphate Source

Simanga R Gama1, Margret Vogt2, Thomas Kalina2

  • 1Department of Chemistry , Queen's University , Kingston , Ontario , Canada.

ACS Chemical Biology
|February 28, 2019
PubMed

Insights

Marine bacteria metabolize methylphosphonic acid via a novel oxidative pathway, independent of the known carbon-phosphorus lyase. This discovery reveals a new source of inorganic phosphate (Pi) for oceanic microbes.

Area of Science:

  • Microbiology
  • Biochemistry
  • Environmental Science

Background:

  • Methylphosphonic acid is a key component of marine dissolved organic phosphorus.
  • Marine bacteria utilize methylphosphonic acid as a source of inorganic phosphate (Pi) when other sources are scarce.
  • The known pathway for methylphosphonic acid conversion to Pi involves carbon-phosphorus lyase, producing methane.

Purpose of the Study:

  • To investigate the metabolic fate of methylphosphonic acid in marine bacteria lacking the carbon-phosphorus lyase pathway.
  • To identify and characterize novel enzymes involved in methylphosphonic acid catabolism.

Main Methods:

  • Genomic analysis of Gimesia maris DSM8797 to identify relevant gene loci.
  • Heterologous expression and purification of putative enzymes (GmPhnY* and GmPhnZ1) in E. coli.
  • In vitro enzymatic assays using synthetic phosphonates and 31P NMR spectroscopy to determine reaction products.

Main Results:

  • Gimesia maris DSM8797 catabolizes methylphosphonic acid via an oxidative pathway, distinct from the carbon-phosphorus lyase route.
  • The pathway involves two non-heme Fe(II)-dependent oxygenases, GmPhnY* and GmPhnZ1.
  • GmPhnY* converts methylphosphonic acid to hydroxymethylphosphonic acid, which GmPhnZ1 oxidizes to formic acid and Pi.
  • This pathway does not process 2-aminoethylphosphonic acid.

Conclusions:

  • A new oxidative pathway for methylphosphonic acid breakdown in marine bacteria has been elucidated.
  • This pathway provides an alternative source of inorganic phosphate for bacteria lacking the canonical carbon-phosphorus lyase.
  • The findings expand our understanding of phosphorus cycling in marine ecosystems.

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