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Automated Multiscale Approach To Predict Self-Diffusion from a Potential Energy Field.
Amber Mace1,2, Senja Barthel1, Berend Smit1
1Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques, Valais , Ecole Polytechnique Fédérale de Lausanne (EPFL) , Rue de l'Industrie 17 , CH-1951 Sion , Switzerland.
This study presents an efficient algorithm for analyzing gas diffusion in nanoporous materials. The method accurately predicts diffusion pathways and rates, overcoming limitations of traditional molecular dynamics simulations.
Area of Science:
- Materials Science
- Chemical Engineering
- Computational Chemistry
Background:
- Estimating gas diffusion in nanoporous materials is crucial for large-scale screening.
- Brute-force molecular dynamics simulations are computationally expensive, especially for systems with low diffusion coefficients.
- Transition state theory offers a more efficient alternative but requires automatic detection of diffusion pathways and transition states.
Purpose of the Study:
- To develop an efficient algorithm for analyzing gas diffusion in nanoporous materials.
- To enable large-scale screening of materials for gas diffusion properties.
- To facilitate transition state theory-based analysis of diffusion processes.
Main Methods:
- An algorithm that analyzes energy grids of moving particles to detect diffusion paths and their directions.
- Identification of energy levels at which diffusion paths form.
- Partitioning of grid coordinates into energy basins and transition states for diffusive systems.
Main Results:
- The algorithm accurately identifies non-diffusive systems.
- It enables a transition state theory-based analysis of diffusion in diffusive systems.
- Tested on methane (CH4) diffusion in zeolites, the method proved accurate, fast, and rigorous.
Conclusions:
- The developed algorithm provides an efficient and accurate method for analyzing gas diffusion in nanoporous materials.
- It overcomes the computational limitations of molecular dynamics for large-scale screening.
- The method is versatile, with no geometric limitations on diffusion tunnels or transition states.
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