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Updated: Jan 7, 2026

An Integrated Workflow of Identification and Quantification on FDR Control-Based Untargeted Metabolome
Published on: September 20, 2022
Identification of bioactive metabolites using activity metabolomics
Markus M Rinschen1, Julijana Ivanisevic2, Martin Giera3
1The Scripps Research Institute, Center for Metabolomics and Mass Spectrometry, La Jolla, CA, USA.
Metabolomics, the study of metabolites, is evolving beyond biomarker discovery. It now reveals how metabolites actively drive biological processes and influence other
Area of Science:
- Biochemistry and Systems Biology
- Metabolomics and 'Omics' Integration
Background:
- Metabolome analysis traditionally focused on biomarker identification for disease diagnosis.
- The role of metabolomics has expanded to uncovering active drivers of biological processes.
- Metabolites influence cellular functions by modulating genome, epigenome, transcriptome, and proteome.
Purpose of the Study:
- To review recent advancements in metabolomics for understanding metabolite influence on other 'omics' levels.
- To highlight the active role of metabolites in physiological and disease states.
- To introduce and discuss 'activity metabolomics' for identifying biologically active metabolites.
Main Methods:
- Review of recent literature on metabolomics and its integration with other 'omics' data.
- Focus on studies demonstrating the functional impact of metabolites on cellular pathways.
- Conceptualization of 'activity metabolomics' as a screening approach.
Main Results:
- Metabolomics is now recognized as a tool for discovering active biological drivers, not just biomarkers.
- Metabolites actively modulate cellular physiology across multiple 'omics' layers.
- The concept of 'activity metabolomics' enables the identification of functionally significant metabolites.
Conclusions:
- Metabolomics offers profound insights into the active roles of metabolites in health and disease.
- The integration of metabolomics with other 'omics' redefines our understanding of biological regulation.
- 'Activity metabolomics' represents a significant advancement in functional metabolite discovery.
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