Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Stability of Substituted Cyclohexanes02:30

Stability of Substituted Cyclohexanes

14.2K
This lesson discusses the stability of substituted cyclohexanes with a focus on energies of various conformers and the effect of 1,3-diaxial interactions.
The two chair conformations of cyclohexanes undergo rapid interconversion at room temperature. Both forms have identical energies and stabilities, each comprising equal amounts of the equilibrium mixture. Replacing a hydrogen atom with a functional group makes the two conformations energetically non-equivalent.
For example, in...
14.2K
Stereoisomerism of Cyclic Compounds02:33

Stereoisomerism of Cyclic Compounds

10.6K
In this lesson, we delve into the role of ring conformation and its stability, which determines the spatial arrangement and, consequently, the molecular symmetry and stereoisomerism of cyclic compounds. 1,2-Dimethylcyclohexane is used as a case study to evaluate the possible number of stereoisomers. Here, given the multiple (n = 2) chiral centers, there are 2n = 4 possible configurations that lack a plane of symmetry, as the ring skeleton exists in a non-planar chair conformation. In addition,...
10.6K
Chair Conformation of Cyclohexane02:02

Chair Conformation of Cyclohexane

17.1K
The chair conformation is the most stable form of cyclohexane due to the absence of angle and torsional strain. The absence of angle strain is a result of cyclohexane’s bond angle being very close to the ideal tetrahedral bond angle of 109.5° in its chair conformer. Similarly, the torsional strain is also absent owing to the perfectly staggered arrangement of bonds.
The hydrogen atoms linked to carbons are arranged in two different axial and equatorial orientations to achieve this...
17.1K
Conformations of Cyclohexane02:11

Conformations of Cyclohexane

14.5K
Cyclohexane does not exist in a planar form due to the high angle and torsional strain it would experience in the planar structure. Instead, it adopts non-planar chair and boat conformations.
The chair form is the most stable and derives its name from its resemblance to the “easy chair.” In the chair conformation, two carbon atoms are arranged out-of-plane — one above and one below, minimizing the torsional strain. In the chair form, the bond angle is very close to the ideal...
14.5K
Conformations of Cycloalkanes02:29

Conformations of Cycloalkanes

13.5K
Adolf von Baeyer attempted to explain the instabilities of small and large cycloalkane rings using the concept of angle strain — the strain caused by the deviation of bond angles from the ideal 109.5° tetrahedral value for sp3  hybridized carbons. However, while cyclopropane and cyclobutane are strained, as expected from their highly compressed bond angles, cyclopentane is more strained than predicted, and cyclohexane is virtually strain-free. Hence, Baeyer’s theory that...
13.5K
Regioselectivity and Stereochemistry of Acid-Catalyzed Hydration02:34

Regioselectivity and Stereochemistry of Acid-Catalyzed Hydration

9.2K
The rate of acid-catalyzed hydration of alkenes depends on the alkene's structure, as the presence of alkyl substituents at the double bond can significantly influence the rate.
9.2K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Ppb-Level H<sub>2</sub>S Gas Sensor Based on Li-Doped CuO Nanoparticles Compounded on Graphene at Room Temperature.

ACS sensors·2026
Same author

Sub-10 nm S-Doped In<sub>2</sub>O<sub>3</sub> Cubes Prepared via a Protein Hydrogel Space-Confined Strategy for ppb-Level Xylene Detection with Enhanced Electron Transfer Capability.

ACS sensors·2025
Same author

Regulation of CC bonds in penta-graphene by oxidative functionalization: a prototype of penta-graphene oxide (PGO).

Physical chemistry chemical physics : PCCP·2024
Same author

Electronic structure analysis of NiO quantum dot-modified jackfruit-shaped ZnO sensors and sensing properties investigation of their highly sensitive and selective for butyl acetate.

Journal of colloid and interface science·2023
Same author

g-C<sub>3</sub>N<sub>4</sub>/TiO<sub>2</sub>-B{100} heterostructures used as promising photocatalysts for water splitting from a hybrid density functional study.

Physical chemistry chemical physics : PCCP·2022
Same author

The effect of oxidation on the electronic properties of penta-graphene: first-principles calculation.

RSC advances·2022
Same journal

Monthly Energy, Exergy, Environmental, and Economic Performance and Green Hydrogen Production Analysis of a Flat-Plate Solar Collector-Driven Organic Rankine Cycle System Under Variable Mass Flow and Irradiance.

ChemistryOpen·2026
Same journal

The Versatile Structural World of Methanedi- and Trisulfonic Acid and Their Salts.

ChemistryOpen·2026
Same journal

The Role of Conformational Preorganization in the Reactivity of cis-1,2-Dimesylate-bis(benzyloxy)cyclooctane: An Activation Strain Perspective.

ChemistryOpen·2026
Same journal

Epoxy Clerodane Diterpene Attenuates the Differentiated Adipocyte Hypertrophy and Enhances Mitochondrial Metabolism.

ChemistryOpen·2026
Same journal

Magnetic Nickel-Containing Heterogeneous Catalysts for the Heck Reaction: Catalyst Design, Performance, and Sustainability.

ChemistryOpen·2026
Same journal

First-Principles Design of Room Temperature Ferromagnetic Metallic Rare-Earth Zintl Compounds AB<sub>2</sub>C<sub>2</sub> (A = Ce, Pr, Nd; B = Li; C = Sb) for Next-Generation Spintronic and Magneto-Electronic Applications.

ChemistryOpen·2026
See all related articles

Related Experiment Video

Updated: Nov 25, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.5K

Ring-Stacking Water Clusters: Morphology and Stabilities.

Liu Yang1, Hanyang Ji1, Xiaojie Liu1,2

  • 1Center for Quantum Sciences and School of Physics Northeast Normal University Changchun 130117 China.

Chemistryopen
|March 1, 2019
PubMed
Summary
This summary is machine-generated.

Researchers explored water clusters with ring stacking using ab initio calculations. The most stable structures featured alternating clockwise-anticlockwise stacking patterns in single rings.

Keywords:
ab initio calculationselectronic structurehydrogen bondingperturbation theoryweak interactions

More Related Videos

Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates
06:35

Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates

Published on: February 15, 2016

8.3K
Controlling the Size, Shape and Stability of Supramolecular Polymers in Water
16:24

Controlling the Size, Shape and Stability of Supramolecular Polymers in Water

Published on: August 2, 2012

19.1K

Related Experiment Videos

Last Updated: Nov 25, 2025

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry
12:11

Computation of Atmospheric Concentrations of Molecular Clusters from ab initio Thermochemistry

Published on: April 8, 2020

8.5K
Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates
06:35

Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates

Published on: February 15, 2016

8.3K
Controlling the Size, Shape and Stability of Supramolecular Polymers in Water
16:24

Controlling the Size, Shape and Stability of Supramolecular Polymers in Water

Published on: August 2, 2012

19.1K

Area of Science:

  • Computational chemistry
  • Molecular modeling
  • Physical chemistry

Background:

  • Water clusters are fundamental to understanding hydrogen bonding and molecular interactions.
  • Ring stacking motifs are prevalent in various chemical and biological systems.
  • Investigating the stability of these clusters provides insights into intermolecular forces.

Purpose of the Study:

  • To determine the stable structures and interaction energies of water clusters with ring stacking motifs.
  • To analyze the influence of stacking patterns (single vs. multi-ring) on cluster stability.
  • To elucidate the factors governing the relative stability of different water cluster isomers.

Main Methods:

  • Ab initio calculations were employed to model the electronic structure and energies.
  • Water clusters were constructed using tetramer, pentamer, and hexamer rings.
  • Isomers were analyzed based on stacking patterns, including single-ring and multi-ring configurations.

Main Results:

  • The most stable single-ring-stacking isomers exhibited an alternating clockwise-anticlockwise pattern.
  • Four-layer single-ring-stacking isomers were less energetically favorable than two-layer multi-ring isomers.
  • Isomer stability was correlated with hydrogen bond strength and molecular elastic distortions.

Conclusions:

  • The study identified specific stacking patterns that enhance the stability of water clusters.
  • Energetic favorability depends on the number of layers and the arrangement of rings.
  • Hydrogen bonding and molecular strain are key determinants of water cluster stability in these motifs.