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Establishing a Competing Risk Regression Nomogram Model for Survival Data
Published on: October 23, 2020
Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression
Daichi Shigemizu1,2,3,4, Shintaro Akiyama5, Yuya Asanomi5
1Medical Genome Center, National Center for Geriatrics and Gerontology, Obu, Aichi, 474-8511, Japan. daichi@ncgg.go.jp.
Abstract:
Alzheimer's disease (AD) is the most common subtype of dementia, followed by Vascular Dementia (VaD), and Dementia with Lewy Bodies (DLB). Recently, microRNAs (miRNAs) have received a lot of attention as the novel biomarkers for dementia. Here, using serum miRNA expression of 1,601 Japanese individuals, we investigated potential miRNA biomarkers and constructed risk prediction models, based on a supervised principal component analysis (PCA) logistic regression method, according to the subtype of dementia. The final risk prediction model achieved a high accuracy of 0.873 on a validation cohort in AD, when using 78 miRNAs: Accuracy = 0.836 with 86 miRNAs in VaD; Accuracy = 0.825 with 110 miRNAs in DLB. To our knowledge, this is the first report applying miRNA-based risk prediction models to a dementia prospective cohort. Our study demonstrates our models to be effective in prospective disease risk prediction, and with further improvement may contribute to practical clinical use in dementia.
Insights
This study identifies microRNAs (miRNAs) as novel biomarkers for dementia subtypes like Alzheimer's disease (AD), Vascular Dementia (VaD), and Dementia with Lewy Bodies (DLB). miRNA-based models accurately predict dementia risk in a prospective cohort, showing potential for clinical application.
Area of Science:
- Biomarkers and Diagnostics
- Neuroscience
- Genetics and Genomics
Background:
- Dementia, including Alzheimer's disease (AD), Vascular Dementia (VaD), and Dementia with Lewy Bodies (DLB), poses a significant health challenge.
- MicroRNAs (miRNAs) are emerging as promising novel biomarkers for various diseases, including dementia.
- Accurate and early diagnosis of dementia subtypes is crucial for effective management and treatment.
Purpose of the Study:
- To investigate serum miRNA expression profiles for identifying novel dementia biomarkers.
- To construct and validate subtype-specific miRNA-based risk prediction models for dementia.
- To assess the potential clinical utility of miRNA biomarkers in prospective dementia risk prediction.
Main Methods:
- Serum samples from 1,601 Japanese individuals were analyzed for miRNA expression.
- Supervised principal component analysis (PCA) logistic regression was employed to build risk prediction models.
- Models were validated on a separate cohort to assess predictive accuracy for AD, VaD, and DLB.
Main Results:
- Risk prediction models demonstrated high accuracy: 0.873 for AD (78 miRNAs), 0.836 for VaD (86 miRNAs), and 0.825 for DLB (110 miRNAs).
- This study represents the first application of miRNA-based risk prediction models in a dementia prospective cohort.
- The developed models showed effectiveness in prospective disease risk prediction.
Conclusions:
- Serum miRNAs can serve as effective biomarkers for predicting the risk of dementia subtypes.
- The developed miRNA-based risk prediction models show promise for future clinical application in dementia diagnosis.
- Further refinement of these models could significantly contribute to early and accurate dementia detection.
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