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Updated: Jan 28, 2026

Tumorsphere Derivation and Treatment from Primary Tumor Cells Isolated from Mouse Rhabdomyosarcomas
Published on: September 13, 2019
Epigenetic Regulation of the PTEN-AKT-RAC1 Axis by G9a Is Critical for Tumor Growth in Alveolar Rhabdomyosarcoma
Akshay V Bhat1, Monica Palanichamy Kala1, Vinay Kumar Rao1
1Department of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Abstract:
Alveolar rhabdomyosarcoma (ARMS) is an aggressive pediatric cancer with poor prognosis. As transient and stable modifications to chromatin have emerged as critical mechanisms in oncogenic signaling, efforts to target epigenetic modifiers as a therapeutic strategy have accelerated in recent years. To identify chromatin modifiers that sustain tumor growth, we performed an epigenetic screen and found that inhibition of lysine methyltransferase G9a significantly affected the viability of ARMS cell lines. Targeting expression or activity of G9a reduced cellular proliferation and motility in vitro and tumor growth in vivo. Transcriptome and chromatin immunoprecipitation-sequencing analysis provided mechanistic evidence that the tumor-suppressor PTEN was a direct target gene of G9a. G9a repressed PTEN expression in a methyltransferase activity-dependent manner, resulting in increased AKT and RAC1 activity. Re-expression of constitutively active RAC1 in G9a-deficient tumor cells restored oncogenic phenotypes, demonstrating its critical functions downstream of G9a. Collectively, our study provides evidence for a G9a-dependent epigenetic program that regulates tumor growth and suggests targeting G9a as a therapeutic strategy in ARMS. SIGNIFICANCE: These findings demonstrate that RAC1 is an effector of G9a oncogenic functions and highlight the potential of G9a inhibitors in the treatment of ARMS.
Insights
Targeting lysine methyltransferase G9a inhibits pediatric alveolar rhabdomyosarcoma (ARMS) growth by restoring tumor suppressor PTEN. This epigenetic strategy, involving RAC1, offers a promising new therapeutic avenue for ARMS treatment.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Alveolar rhabdomyosarcoma (ARMS) is an aggressive pediatric cancer with a poor prognosis.
- Epigenetic modifications, including chromatin changes, play critical roles in cancer development.
- Targeting epigenetic modifiers presents a promising therapeutic strategy for various cancers.
Purpose of the Study:
- To identify chromatin modifiers crucial for ARMS tumor growth.
- To investigate the role of lysine methyltransferase G9a in ARMS.
- To elucidate the downstream mechanisms by which G9a influences ARMS progression.
Main Methods:
- Performed an epigenetic screen to identify key chromatin modifiers.
- Utilized cell viability assays, proliferation, and motility assays in vitro.
- Conducted in vivo tumor growth studies.
- Employed transcriptome and chromatin immunoprecipitation-sequencing (ChIP-seq) analyses.
Main Results:
- Inhibition of G9a significantly impacted ARMS cell viability, proliferation, and motility.
- Targeting G9a reduced tumor growth in vivo.
- G9a directly represses the tumor suppressor PTEN expression in a methyltransferase-dependent manner.
- G9a inhibition leads to decreased AKT and RAC1 activity; RAC1 is a critical downstream effector.
Conclusions:
- G9a inhibition is a viable therapeutic strategy for ARMS.
- G9a regulates ARMS tumor growth through an epigenetic program involving PTEN and RAC1.
- Targeting G9a may offer a novel treatment approach for pediatric alveolar rhabdomyosarcoma.
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