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Published on: February 10, 2014
Pocket similarity identifies selective estrogen receptor modulators as microtubule modulators at the taxane site
Yu-Chen Lo1, Olga Cormier2, Tianyun Liu1,3
1Department of Bioengineering, Stanford University, Stanford, CA, USA.
Abstract:
Taxanes are a family of natural products with a broad spectrum of anticancer activity. This activity is mediated by interaction with the taxane site of beta-tubulin, leading to microtubule stabilization and cell death. Although widely used in the treatment of breast cancer and other malignancies, existing taxane-based therapies including paclitaxel and the second-generation docetaxel are currently limited by severe adverse effects and dose-limiting toxicity. To discover taxane site modulators, we employ a computational binding site similarity screen of > 14,000 drug-like pockets from PDB, revealing an unexpected similarity between the estrogen receptor and the beta-tubulin taxane binding pocket. Evaluation of nine selective estrogen receptor modulators (SERMs) via cellular and biochemical assays confirms taxane site interaction, microtubule stabilization, and cell proliferation inhibition. Our study demonstrates that SERMs can modulate microtubule assembly and raises the possibility of an estrogen receptor-independent mechanism for inhibiting cell proliferation.
Insights
Selective estrogen receptor modulators (SERMs) unexpectedly interact with the beta-tubulin taxane binding site. These compounds stabilize microtubules and inhibit cancer cell proliferation, offering a new therapeutic avenue beyond traditional taxanes.
Area of Science:
- Biochemistry
- Pharmacology
- Oncology
Background:
- Taxanes like paclitaxel and docetaxel are vital anticancer drugs targeting beta-tubulin.
- Current taxane therapies face limitations due to severe adverse effects and toxicity.
Purpose of the Study:
- To identify novel taxane site modulators.
- To explore potential new anticancer agents by screening drug-like pockets.
Main Methods:
- Computational binding site similarity screening of over 14,000 protein pockets from the Protein Data Bank (PDB).
- Evaluation of selective estrogen receptor modulators (SERMs) using cellular and biochemical assays.
Main Results:
- An unexpected structural similarity was found between the estrogen receptor and the beta-tubulin taxane binding pocket.
- Nine tested SERMs demonstrated interaction with the taxane binding site.
- SERMs induced microtubule stabilization and inhibited cancer cell proliferation.
Conclusions:
- Selective estrogen receptor modulators (SERMs) can modulate microtubule assembly.
- SERMs show potential as anticancer agents through an estrogen receptor-independent mechanism.
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