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Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Oxidative DNA Damage-Mediated Genomic Heterogeneity Is Regulated by NKX3.1 in Prostate Cancer
Bilge Debelec-Butuner1, Aykut Bostancı2, Filiz Ozcan3
1a Department of Pharmaceutical Biotechnology, Faculty of Pharmacy , Ege University , Izmir , Turkey.
Abstract:
The 8-hydroxy-2'-deoxyguanosine (8-OHdG) damages are base damages induced by reactive oxygen species. We aimed to investigate the role of Androgen Receptor and NKX3.1 in 8-OHdG formation and repair activation by quantitating the DNA damage using Aklides.NUK system. The data demonstrated that the loss of NKX3.1 resulted in increased oxidative DNA damage and its overexpression contributes to the removal of menadione-induced 8-OHdG damage even under oxidative stress conditions. Moreover, 8-oxoguanine DNA glycosylase-1 (OGG1) expression level positively correlates to NKX3.1 expression. Also in this study, first time a reliable cell-based quantitation method for 8-OHdG damages is reported and used for data collection.
Insights
NKX3.1 plays a crucial role in repairing oxidative DNA damage, specifically 8-hydroxy-2'-deoxyguanosine (8-OHdG) formation. Its overexpression aids in removing this damage, correlating with OGG1 expression.
Area of Science:
- Molecular Biology
- Oxidative Stress Research
- Genetics
Background:
- 8-hydroxy-2 -deoxyguanosine (8-OHdG) is a key marker of DNA damage caused by reactive oxygen species.
- The roles of Androgen Receptor and NKX3.1 in oxidative DNA damage and repair remain incompletely understood.
Purpose of the Study:
- To investigate the involvement of Androgen Receptor and NKX3.1 in the formation and repair of 8-OHdG.
- To establish and utilize a novel cell-based method for quantifying 8-OHdG DNA damage.
Main Methods:
- Quantitation of 8-OHdG DNA damage using the Aklides.NUK system.
- Analysis of NKX3.1 and 8-oxoguanine DNA glycosylase-1 (OGG1) expression levels.
- Investigating the effects of NKX3.1 loss and overexpression on oxidative DNA damage.
Main Results:
- Loss of NKX3.1 significantly increased oxidative DNA damage (8-OHdG).
- Overexpression of NKX3.1 facilitated the removal of menadione-induced 8-OHdG, even under oxidative stress.
- NKX3.1 expression positively correlated with OGG1 expression levels.
Conclusions:
- NKX3.1 is a critical regulator in the cellular response to oxidative DNA damage.
- NKX3.1's role in 8-OHdG repair is linked to OGG1 expression.
- A reliable cell-based method for 8-OHdG quantitation has been developed and validated.
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