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Higher SNR PET image prediction using a deep learning model and MRI image.

Chih-Chieh Liu1, Jinyi Qi1,2

  • 1Department of Biomedical Engineering, University of California, Davis, CA, United States of America.

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|March 8, 2019
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This study introduces a deep neural network (DNN) model using PET and MRI images to enhance PET image signal-to-noise ratio (SNR). The novel 3U-net approach improves image quality without needing higher SNR PET data for training.

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Neuroscience

Background:

  • Positron Emission Tomography (PET) images often exhibit a poor signal-to-noise ratio (SNR), limiting diagnostic accuracy.
  • Deep neural networks (DNNs) show promise for image denoising, but training often requires high-quality reference images.

Purpose of the Study:

  • To develop and evaluate a DNN model that improves PET image SNR using co-registered MRI data.
  • To achieve noise reduction and accelerated image reconstruction without relying on higher SNR PET training data.

Main Methods:

  • A deep neural network (DNN) model comprising three modified U-Nets (3U-net) was proposed.
  • Training involved PET images reconstructed with filtered-backprojection (FBP) as input and maximum likelihood expectation maximization (MLEM) as target.
  • Digital brain phantoms with simulated Poisson noise and attenuation effects were used for evaluation, with additional noise introduced to training inputs.

Main Results:

  • The proposed 3U-net model, trained with PET/MRI data, reduced mean squared error (MSE) by 34.0% compared to a 1U-net model trained with only PET data.
  • This MSE reduction is equivalent to a 2.9-fold increase in PET data count levels.
  • Lesion contrast-to-noise ratio (CNR) improved 2.7-fold (1U-net) and 1.4-fold (3U-net) compared to MLEM images, demonstrating enhanced lesion detectability.

Conclusions:

  • The proposed DNN method effectively improves PET image SNR and accelerates reconstruction using readily available PET and MRI data.
  • This approach offers a viable solution for enhancing PET image quality in clinical settings without the need for specialized high-SNR acquisitions.