Molecular evolutionary and structural analysis of familial exudative vitreoretinopathy associated FZD4 gene

Suman Seemab1, Nashaiman Pervaiz1, Rabail Zehra1

  • 1National Center for Bioinformatics, Program of Comparative and Evolutionary Genomics, Faculty of Biological Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.

Abstract

Insights

Frizzled receptor FZD4 evolution reveals critical C-terminal regions influencing familial exudative vitreoretinopathy (FEVR). Understanding these regions offers new therapeutic targets for retinal vascular diseases.

Area of Science:

  • Evolutionary biology
  • Molecular biology
  • Genetics

Background:

  • Frizzled receptors are G-protein coupled receptors involved in cell signaling, proliferation, and death.
  • Frizzled family members play roles in cancer, cardiac hypertrophy, familial exudative vitreoretinopathy (FEVR), and schizophrenia.

Purpose of the Study:

  • Investigate evolutionary and structural aspects of Frizzled receptors, focusing on the FZD4 gene linked to FEVR.
  • Analyze the impact of FEVR-associated mutations on FZD4 protein structure and function.

Main Methods:

  • Phylogenetic analysis to trace Frizzled receptor diversification.
  • Comparative structural analysis of FZD4 mutations.
  • Identification of critical protein regions and motifs.

Main Results:

  • Frizzled receptor diversification dates back to early metazoan evolution.
  • FEVR-associated missense mutations in FZD4 impact a common protein region (amino acids 495-537) via epistasis.
  • This critical region contains PDZ binding and recognition motifs.

Conclusions:

  • FZD4 has evolved new functions through gene duplication, sequence divergence, and conformational changes.
  • The C-terminal region (amino acids 495-537) of FZD4 is crucial for its function and pathophysiology.
  • This region presents potential for developing therapeutics for human retinal vascular diseases.

Related Concept Videos

Gene Families01:57

Gene Families

Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
9.9K
Gene Families01:57

Gene Families

3.7K
What is Evolutionary History?02:35

What is Evolutionary History?

Scientists record evolutionary history by analyzing fossil, morphological, and genetic data. The fossil record documents the history of life on Earth and provides evidence for evolution. However, both fossil and living organisms offer evidence that outlines Earth’s evolutionary history.
43.2K
Protein Families02:47

Protein Families

Protein families are groups of homologous proteins; that is, they have similarities in amino acid sequences and three-dimensional structures. Protein families usually occur because of gene duplication, where an additional copy of a gene is inserted into the genome of an organism.   Mutations that change the amino acids but still allow the protein to be properly synthesized, will lead to new protein family members.   If these new proteins contain similar amino acids in key...
16.8K
Molecular Structure and Acidity02:34

Molecular Structure and Acidity

An acid can be deprotonated to form a conjugate base or an anion. If the produced anion is more stable, then the acid is stronger. On the contrary, if the anion is unstable, then the acid is weaker. Hence, to determine the acidity of the compound, the stability of its conjugate base is studied using various factors.
The size effect explains the change in atomic size on acidity. When comparing the acids formed from elements that belong to the same column in the periodic table, their atomic sizes...
20.8K
Structure of a Gene01:30

Structure of a Gene

A gene is the fundamental unit of heredity. Every individual has two copies of each gene, one inherited from each parent. Although most people contain the same genes, there is a small fraction that is slightly different amongst people. A gene with a small difference in its sequence of DNA bases forms different alleles, contributing to different phenotypes.
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
15.7K