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Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Molecular characterization of the cyclin-dependent protein kinase 6 in whitefish (Coregonus lavaretus) and its
Alicja Łakomiak1, Paweł Brzuzan1, Ewa Jakimiuk2
1Department of Environmental Biotechnology, Faculty of Environmental Sciences, University of Warmia and Mazury in Olsztyn, ul. Słoneczna 45G, 10-709 Olsztyn, Poland.
Abstract:
Cyclin-dependent protein kinase 6 (CDK6) plays a pivotal role in the regulation of the cell cycle and cell proliferation in mammals, and disruption of its expression by various microRNAs has been implicated in the pathogenesis of multiple human cancers. In mammals, miR-34a acts as a downstream effector of p53, and thus indirectly targets Cdk6, abrogating its effects. However, no studies have been done so far to examine the mechanistic involvement of miR-34a in the silencing of cdk6 in fish. In the present study, we found that the cDNA sequence of whitefish cdk6 has a 3'UTR region that contains a binding site for miR-34a. Using a luciferase reporter assay, we demonstrated that whitefish cdk6 is a direct target of miR-34a in vitro. In order to confirm this relationship in vivo, we measured the miR-34a and cdk6 mRNA expression patterns in the liver of whitefish after short-term (8, 24, and 48 h) and long-term (14 and 28 days) exposure to microcystin-LR (MC-LR), a known hepatotoxin and tumor promoter. In contrast to the in vitro findings, we noticed an up-regulation of miR-34a and cdk6 expression after long-term MC-LR treatment. While these results indicate that both, miR-34a and cdk6 are responsive to MC-LR treatment, they do not support the presence of a miR-34a:cdk6 mRNA regulatory pair in the MC-LR-challanged whitefish liver in vivo. On the other hand, our findings suggests that cell regulatory elements, partnering with either miR-34a or cdk6, are worthy of further screening to better understand the molecular mechanisms that underlie the physiological response of fish challenged with hepatotoxic environmental pollutants like microcystins.
Insights
This study investigated microRNA-34a (miR-34a) regulation of cyclin-dependent protein kinase 6 (CDK6) in whitefish. While miR-34a targets CDK6 in vitro, this regulatory relationship was not observed in fish exposed to microcystin-LR.
Area of Science:
- * Molecular Biology
- * Environmental Toxicology
- * Fish Biology
Background:
- * Cyclin-dependent protein kinase 6 (CDK6) regulates cell cycle and proliferation, and its dysregulation is linked to cancer.
- * MicroRNA-34a (miR-34a) acts as a tumor suppressor by targeting CDK6 in mammals.
- * The role of miR-34a in CDK6 regulation in fish remains unexamined.
Purpose of the Study:
- * To investigate the mechanistic involvement of miR-34a in the silencing of cdk6 in whitefish.
- * To determine if whitefish cdk6 is a direct target of miR-34a.
- * To examine the expression patterns of miR-34a and cdk6 in response to microcystin-LR (MC-LR) exposure in vivo.
Main Methods:
- * Identified a miR-34a binding site in the 3'UTR of whitefish cdk6.
- * Utilized luciferase reporter assays to confirm direct targeting of whitefish cdk6 by miR-34a in vitro.
- * Measured miR-34a and cdk6 mRNA levels in whitefish liver following short-term and long-term MC-LR exposure.
Main Results:
- * Whitefish cdk6 possesses a 3'UTR binding site for miR-34a, confirming it as a direct target in vitro.
- * Long-term exposure to MC-LR resulted in the upregulation of both miR-34a and cdk6 mRNA in whitefish liver.
- * In vivo results contradicted in vitro findings, showing no evidence of miR-34a:cdk6 mRNA regulatory pair under MC-LR challenge.
Conclusions:
- * Whitefish cdk6 is directly targeted by miR-34a in vitro.
- * The miR-34a:cdk6 regulatory axis is not maintained in whitefish liver following long-term MC-LR exposure.
- * Further research into other regulatory elements interacting with miR-34a or cdk6 is needed to understand fish responses to hepatotoxins.
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