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Predicting lab values for gastrointestinal bleeding patients in the intensive care unit: A comparative study on the
Golnar K Mahani1, Mohammad-Reza Pajoohan1
1Department of Computer Engineering, Yazd University, Yazd, Iran.
Insights
This study developed a predictive system to identify unnecessary laboratory blood tests, specifically Calcium and Hematocrit, for gastrointestinal bleeding patients. While promising, clustering patients by comorbidity did not improve prediction accuracy due to dispersed abnormal test results.
Area of Science:
- Medical Informatics
- Clinical Laboratory Science
- Data Science in Healthcare
Background:
- Unnecessary laboratory blood tests pose risks and increase healthcare costs.
- Predictive modeling can help identify and reduce superfluous diagnostic procedures.
- Gastrointestinal bleeding patients often undergo extensive laboratory testing.
Purpose of the Study:
- To develop and evaluate a predictive system for identifying unnecessary Calcium and Hematocrit laboratory blood tests.
- To assess the impact of patient comorbidity clustering on the accuracy of laboratory test value prediction.
- To improve patient safety and resource allocation in clinical settings.
Main Methods:
- Utilized the MIMIC-II database, with comprehensive data preprocessing and expert validation.
- Developed a prediction system using zero-order Takagi-Sugeno fuzzy modeling and sequential forward selection.
- Implemented a second system involving patient clustering by comorbidity before feature selection and prediction.
Main Results:
- The initial fuzzy modeling prediction system showed promising results for Calcium and Hematocrit.
- Clustering patients based on comorbidity did not lead to an average improvement in prediction accuracy.
- The dispersion of abnormal laboratory test values across clusters likely hindered performance gains.
Conclusions:
- Predictive modeling offers a viable approach to flagging potentially unnecessary laboratory tests.
- Comorbidity-based patient clustering may not enhance predictive accuracy for rare or dispersed abnormal lab values.
- Further research is needed to refine models for accurate prediction in diverse patient populations.
Abstract:
Since a significant number of frequent laboratory blood tests are unnecessary and these tests may have complications, developing a system that could identify unnecessary tests is essential. In this paper, a value prediction approach is presented to predict the values of Calcium and Hematocrit laboratory blood tests for upper gastrointestinal bleeding patients and patients with unspecified hemorrhage in their gastrointestinal tract. The data have been extracted from the MIMIC-II database. By considering the issues of MIMIC-II in the process of data extraction and using expert knowledge, comprehensive preprocessing has been performed to validate the data. The first prediction system is developed using zero order Takagi-Sugeno fuzzy modeling and the sequential forward selection method. The results of this prediction system for target laboratory tests are promising. In the second proposed prediction system, patients are clustered using their comorbidity information before the final prediction phase. For each cluster, a medication feature is constructed and added to the data for the final feature selection. Although it was expected that clustering patients based on comorbidity data could improve the results of value prediction, the results were not improved in average. The reason for this could be the small number of abnormal laboratory test samples and their dispersion in clusters. These abnormal values would be more dispersed in the model with clustering phase, when they are scattered over different clusters.
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