Related Experiment Video
Updated: Jan 27, 2026

In vivo and in vitro Studies of Adaptor-clathrin Interaction
Published on: January 26, 2011
Clathrin Adaptor Complex-interacting Protein Irc6 Functions through the Conserved C-Terminal Domain
Huajun Zhou1, Giancarlo Costaguta2, Gregory S Payne3
1Department of Biological Chemistry, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
The yeast protein Irc6, essential for vesicle transport, requires its C-terminal amino acids for binding to AP-1. Its N-terminal domain also plays a role in AP-1-mediated transport, suggesting diverse cellular functions.
Area of Science:
- Cell biology
- Molecular biology
- Membrane trafficking
Background:
- Clathrin coats mediate vesicle formation and transport.
- Clathrin adaptors orchestrate coat assembly.
- Yeast Irc6 is an orthologue of human p34, linked to punctate palmoplantar keratoderma.
Purpose of the Study:
- Investigate the functional domains of yeast Irc6.
- Determine the role of Irc6 in AP-1-dependent transport.
- Explore the cellular functions of Irc6.
Main Methods:
- Site-directed mutagenesis to alter Irc6 C-terminus.
- Overexpression of Irc6 domains.
- Analysis of AP-1 binding and transport function.
- Genetic interaction analysis.
Main Results:
- The C-terminal two amino acids of Irc6 are essential for AP-1 binding and transport.
- Overexpression of the N-terminal domain partially rescues AP-1-mediated transport.
- Negative genetic interactions of irc6∆ mutants implicate Irc6 in membrane traffic and nuclear processes.
Conclusions:
- Irc6's C-terminus is critical for AP-1 interaction and function.
- Both N- and C-terminal domains contribute to Irc6's role in AP-1-mediated transport.
- Irc6 has diverse cellular roles beyond vesicle transport, potentially involving nuclear processes.
More Related Videos
Related Concept Videos
Conservation of Protein Domains Over Different Proteins
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
Conservation of Protein Domains
Conserved Binding Sites
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
Protein Complex Assembly
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Mechanical Protein Functions

