A toolset to study functions of Cytosolic non-specific dipeptidase 2 (CNDP2) using Drosophila as a model organism

Evgeniya N Andreyeva1, Anna A Ogienko2,3, Tatiana D Dubatolova2

  • 1Institute of Molecular and Cellular Biology, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, 630090, Russia. andreeva@mcb.nsc.ru.

BMC Genetics
|March 20, 2019
PubMed
Abstract

Insights

Researchers developed tools to study the CNDP2 gene in fruit flies. The dCNDP2 gene is not essential for fly survival, but its protein localizes to the nucleus and cytoplasm, suggesting potential roles.

Area of Science:

  • Genetics
  • Molecular Biology
  • Developmental Biology

Background:

  • The CNDP2 gene's expression is altered in human cancers, but its role in cell growth is unclear.
  • The function of CNDP2 orthologs in model organisms, like Drosophila melanogaster, is largely unknown.
  • The specific function of the D. melanogaster CNDP2 ortholog (dCNDP2) remains uncharacterized.

Purpose of the Study:

  • To develop genetic and molecular tools for investigating dCNDP2 functions in D. melanogaster.
  • To create a null mutation and transgenic fly lines for dCNDP2 research.
  • To generate specific antibodies for dCNDP2 detection.

Main Methods:

  • CRISPR/Cas9-mediated homologous recombination to generate a dCNDP2 null mutation (∆dCNDP2).
  • Generation of transgenic fly lines expressing eGFP-tagged and non-tagged dCNDP2 under UAS control.
  • Production of polyclonal antibodies specific to dCNDP2.

Main Results:

  • ∆dCNDP2 mutants are viable, fertile, and morphologically normal.
  • Expression analysis revealed that only one of two predicted dCNDP2 isoforms is expressed.
  • dCNDP2 protein localizes to both cytoplasm and nucleus and associates with polytene chromosomes.

Conclusions:

  • dCNDP2 is not essential for viability in D. melanogaster under standard conditions.
  • The observed subcellular localization suggests potential roles in both cytoplasmic and nuclear processes.
  • The developed tools will facilitate future functional studies of the conserved CNDP2 protein in a model organism.

Related Concept Videos

Organic Compounds03:02

Organic Compounds

All living things are formed mostly of carbon compounds called organic compounds. The category of organic compounds includes both natural and synthetic compounds that contain carbon. Although a single, precise definition has yet to be identified by the chemistry community, most agree that a defining trait of organic molecules is the presence of carbon as the principal element, bonded to hydrogen and other carbon atoms. However, some carbon-containing compounds such as carbonates, cyanides, and...
57.1K
Levels of Organization01:09

Levels of Organization

Biological organization is the classification of biological structures, ranging from atoms at the bottom of the hierarchy to the Earth's biosphere. Each level of the hierarchy represents an increase in complexity that builds upon the previous level.
Molecules Are Composed of Atoms, and Biomolecules Are Assembled from Molecules:
The most basic levels include atoms, molecules, and biomolecules. Atoms, the smallest unit of ordinary matter, are composed of a nucleus and electrons. Molecules...
140.3K
Cell Specific Gene Expression01:58

Cell Specific Gene Expression

Multicellular organisms contain a variety of structurally and functionally distinct cell types, but the DNA in all the cells originated from the same parent cells. The differences in the cells can be attributed to the differential gene expression. Liver cells, whose functions include detoxification of blood, production of bile to metabolize fats, and synthesis of proteins essential for metabolism, must express a specific set of genes to perform their functions. Gene expression also varies with...
16.5K
Functional Groups02:45

Functional Groups

Functional groups are a group of atoms with characteristic properties, which when linked to the carbon skeleton of a molecule, alter the properties of that molecule. For example, the presence of certain functional groups on a molecule will make them hydrophilic, whereas others will make them hydrophobic. These functional groups are an indispensable part of organic chemistry and important components of biological molecules, such as carbohydrates, proteins, lipids, and nucleic acids. Each...
88.2K
Serum Studies: Renal Function Tests01:24

Serum Studies: Renal Function Tests

Renal function tests are crucial for assessing kidney health, monitoring disease progression, and evaluating the kidneys' efficiency in waste elimination, fluid balance, and electrolyte regulation. These tests offer critical insights into kidney function, even though routine measurements may appear normal until there is a significant decline in the glomerular filtration rate or GFR. Typically, signs of kidney impairment only become evident when the GFR falls to about 50% of its normal level.
424
Accessory Organs01:31

Accessory Organs

Accessory organs are those that participate in the digestion of food but do not come into direct contact with it like the mouth, stomach, or intestine do. Accessory organs secrete enzymes into the digestive tract to facilitate the breakdown of food.
74.1K