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Updated: Jan 27, 2026

Scalable Isolation and Purification of Extracellular Vesicles from Escherichia coli and Other Bacteria
Published on: October 13, 2021
A general platform for efficient extracellular expression and purification of Fab from Escherichia coli
Manyu Luo1, Meiqi Zhao1, Cedric Cagliero2
1Engineering Research Center of Cell and Therapeutic Antibody, Ministry of Education, School of Pharmacy, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai, 200240, China.
This study presents a novel Escherichia coli (E. coli) system for efficient extracellular production of antigen-binding fragments (Fabs). The new method overcomes aggregation issues, improving yield and purity for therapeutic antibody fragments.
Area of Science:
- Biotechnology
- Molecular Biology
- Protein Engineering
Background:
- Antigen-binding fragments (Fabs) are crucial components of monoclonal antibody (mAb) therapeutics.
- Escherichia coli (E. coli) is a cost-effective system for producing Fabs.
- Cytoplasmic expression in E. coli leads to Fab aggregation, reducing yields.
Purpose of the Study:
- To develop a novel system for efficient extracellular production of Fabs in E. coli.
- To overcome Fab aggregation issues in the E. coli cytoplasm.
- To evaluate the efficacy of a new system using the alkaline phosphatase (phoA) promoter and heat-stable enterotoxin II (STII) leader sequence.
Main Methods:
- Utilized five different Fab fragments targeting IGF1R, Her2, VEGF, RANKL, and PD-1.
- Employed the alkaline phosphatase (phoA) promoter and heat-stable enterotoxin II (STII) leader sequence for expression and secretion.
- Expressed Fabs in BL21(DE3) E. coli strain under phosphate starvation conditions.
- Purified secreted Fabs using affinity chromatography specific to the constant region of the light chain.
Main Results:
- All five Fab fragments were efficiently expressed and secreted into the culture medium.
- Purified Fabs demonstrated high purity, antigen-binding affinity, and in vitro bioactivity.
- The BL21(DE3) strain showed higher productivity than K-12 strains.
- The phoA promoter exhibited superior secretion ability compared to the T7 promoter.
- The STII signal peptide demonstrated higher extracellular secretion efficiency than pelB.
Conclusions:
- The developed phoA-STII system facilitates efficient extracellular production of Fabs in E. coli.
- This platform overcomes aggregation issues, enhancing yield and purity of functional Fabs.
- The system holds significant promise for the manufacturing of Fab fragments in academic and industrial settings.
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