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Updated: Jan 27, 2026

Sample Preparation and Analysis of RNASeq-based Gene Expression Data from Zebrafish
Published on: October 27, 2017
The genes expression difference between winged and wingless bird cherry-oat aphid Rhopalosiphum padi based on
Rong-Jiao Zhang1,2, Jing Chen3, Li-Yun Jiang1
1Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, No. 1 Beichen West Road, Chaoyang District, Beijing, 100101, P.R. China.
Aphid wing polyphenism, crucial for migration, is explored through RNA-Seq. Key genes involved in wing development and hormonal signaling were identified, with the third instar stage being critical.
Area of Science:
- Entomology
- Developmental Biology
- Genetics
Background:
- Aphids exhibit wing polyphenism, producing winged and wingless forms influenced by environmental cues.
- This polyphenism is vital for aphid migration and host alternation strategies.
- The molecular mechanisms governing aphid wing development remain largely unelucidated.
Purpose of the Study:
- To investigate the molecular mechanisms underlying wing polyphenism in the bird cherry-oat aphid, Rhopalosiphum padi.
- To conduct a comparative transcriptional analysis across all developmental stages using RNA-Seq.
- To identify candidate genes involved in aphid wing development.
Main Methods:
- RNA-Sequencing (RNA-Seq) was employed for comprehensive transcriptional analysis.
- Comparative analysis of gene expression across different developmental stages of Rhopalosiphum padi.
- Identification of differentially expressed genes potentially regulating wing development.
Main Results:
- Several candidate genes associated with biogenic amines and hormones were identified as potentially involved in wing development.
- The third instar larval stage was identified as a critical period for the expression of alternative morphs.
- Thirty-three genes related to wing development showed significant expression changes across developmental stages, including Wnt2, Hh, and Dpp.
Conclusions:
- The study provides the first comprehensive report on wing development in Rhopalosiphum padi using RNA-Seq.
- Candidate genes involved in hormonal and signaling pathways are implicated in regulating aphid wing polyphenism.
- Understanding these molecular mechanisms offers insights into aphid adaptation and pest management strategies.
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