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Updated: Jan 27, 2026

Oral Biofilm Sampling for Microbiome Analysis in Healthy Children
Published on: December 31, 2017
Indirect Effect of Azithromycin Use on the Intestinal Microbiome Diversity of Untreated Children: A Randomized Trial
Catherine E Oldenburg1,2,3, Ali Sié4, Boubacar Coulibaly4
1Francis I. Proctor Foundation, San Francisco.
Insights
Antibiotic use in one child did not alter the gut microbiome of their cohabiting sibling. This study found no evidence of indirect effects of azithromycin on the intestinal microbiome in untreated children sharing a household.
Area of Science:
- Microbiology
- Pediatrics
- Pharmacology
Background:
- Intestinal microbiome composition can be influenced by close contacts.
- Antibiotics can significantly alter the gut microbiome.
Purpose of the Study:
- To investigate if antibiotic administration to one sibling impacts the intestinal microbiome of an untreated cohabiting sibling.
Main Methods:
- A randomized controlled trial was conducted.
- Azithromycin was administered to one sibling, with the untreated sibling serving as a comparison.
Main Results:
- No significant changes were observed in the intestinal microbiome of untreated siblings exposed to azithromycin through a cohabiting sibling.
- The study found no evidence supporting an indirect effect of antibiotic use on the intestinal microbiome of household contacts.
Conclusions:
- Antibiotic exposure in one sibling does not appear to indirectly affect the intestinal microbiome of their untreated cohabiting sibling.
- Findings suggest limited transmission of antibiotic-induced microbiome alterations within households.
Abstract:
Cohabiting children may share components of their intestinal microbiome. We evaluated whether receipt of azithromycin in one sibling confers changes to the intestinal microbiome in an untreated sibling compared with placebo in a randomized controlled trial. We found no evidence of an indirect effect of antibiotic use in cohabiting children. Clinical Trials Registrations: NCT03187834.
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