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Published on: September 18, 2020
Genome-Wide Interrogation of Human Cancers Identifies EGLN1 Dependency in Clear Cell Ovarian Cancers
Colles Price1,2,3, Stanley Gill1,2, Zandra V Ho1
1Broad Institute of Harvard and MIT, Cambridge, Massachusetts.
Abstract:
We hypothesized that candidate dependencies for which there are small molecules that are either approved or in advanced development for a nononcology indication may represent potential therapeutic targets. To test this hypothesis, we performed genome-scale loss-of-function screens in hundreds of cancer cell lines. We found that knockout of EGLN1, which encodes prolyl hydroxylase domain-containing protein 2 (PHD2), reduced the proliferation of a subset of clear cell ovarian cancer cell lines in vitro. EGLN1-dependent cells exhibited sensitivity to the pan-EGLN inhibitor FG-4592. The response to FG-4592 was reversed by deletion of HIF1A, demonstrating that EGLN1 dependency was related to negative regulation of HIF1A. We also found that ovarian clear cell tumors susceptible to both genetic and pharmacologic inhibition of EGLN1 required intact HIF1A. Collectively, these observations identify EGLN1 as a cancer target with therapeutic potential. SIGNIFICANCE: These findings reveal a differential dependency of clear cell ovarian cancers on EGLN1, thus identifying EGLN1 as a potential therapeutic target in clear cell ovarian cancer patients.
Insights
Clear cell ovarian cancers show a specific dependency on EGLN1 (prolyl hydroxylase domain-containing protein 2). Inhibiting EGLN1 with FG-4592 offers a potential therapeutic strategy for these tumors.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Identifying novel therapeutic targets is crucial for treating clear cell ovarian cancer.
- Small molecules targeting candidate dependencies may represent viable therapeutic strategies.
Purpose of the Study:
- To investigate the therapeutic potential of targeting EGLN1 (prolyl hydroxylase domain-containing protein 2) in clear cell ovarian cancer.
- To explore the relationship between EGLN1, HIF1A, and cancer cell proliferation.
Main Methods:
- Genome-scale loss-of-function screens were conducted in numerous cancer cell lines.
- The effects of EGLN1 inhibition (genetic and pharmacologic) on cancer cell proliferation were assessed.
- The role of HIF1A in EGLN1 dependency was investigated through gene deletion studies.
Main Results:
- EGLN1 knockout reduced proliferation in a subset of clear cell ovarian cancer cell lines.
- These cell lines were sensitive to the pan-EGLN inhibitor FG-4592.
- FG-4592 response was dependent on HIF1A, indicating EGLN1 negatively regulates HIF1A.
Conclusions:
- EGLN1 is a potential therapeutic target in clear cell ovarian cancer.
- Ovarian clear cell tumors susceptible to EGLN1 inhibition require intact HIF1A.
- Targeting EGLN1 presents a promising strategy for clear cell ovarian cancer treatment.
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