MicroRNA 4651 regulates nonsense-mediated mRNA decay by targeting SMG9 mRNA

Yanjie Tan1, Zhenfa Ma1, Yi Jin1

  • 1Key Laboratory of Agriculture Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Science, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.

Gene
|March 24, 2019
PubMed

Insights

MicroRNAs regulate gene expression. This study shows miR-4651 inhibits nonsense-mediated mRNA decay (NMD) by targeting SMG9, providing new insights into microRNA-mediated gene regulation.

Area of Science:

  • Molecular Biology
  • RNA Biology
  • Gene Regulation

Background:

  • Nonsense-mediated mRNA decay (NMD) is a crucial RNA surveillance pathway.
  • Mechanisms of microRNA-mediated NMD inhibition are not fully understood.

Purpose of the Study:

  • To investigate the role of microRNAs in regulating NMD.
  • To identify specific microRNAs and their targets involved in NMD modulation.

Main Methods:

  • Utilized miR-4651 mimics and inhibitors for transfection.
  • Employed siRNA to suppress SMG9 expression.
  • Quantified mRNA and protein levels of SMG9, TBL2, and GADD45B.

Main Results:

  • Overexpression of miR-4651 mimic decreased SMG9 expression.
  • SMG9 suppression increased NMD substrates (TBL2, GADD45B) at mRNA and protein levels.
  • miR-4651 inhibition increased SMG9 while decreasing NMD substrates.

Conclusions:

  • miR-4651 directly targets SMG9 mRNA, downregulating its expression.
  • miR-4651 functions as a repressor of the NMD pathway.
  • This study elucidates a novel microRNA-mediated regulatory mechanism for NMD.

Related Concept Videos

Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
11.8K
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

3.3K
Regulated mRNA Transport02:22

Regulated mRNA Transport

In eukaryotes, transcription and translation are compartmentalized; an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. Various proteins bind to the pre-mRNA during these modifications. The mRNA transport takes place with the help of multiple proteins playing...
7.0K
Regulated mRNA Transport02:22

Regulated mRNA Transport

3.4K
Chromatin Structure Regulates pre-mRNA Processing02:41

Chromatin Structure Regulates pre-mRNA Processing

In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
8.1K
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
8.7K