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Measurement of mRNA Decay Rates in Saccharomyces cerevisiae Using rpb1-1 Strains
Published on: December 13, 2014
MicroRNA 4651 regulates nonsense-mediated mRNA decay by targeting SMG9 mRNA
Yanjie Tan1, Zhenfa Ma1, Yi Jin1
1Key Laboratory of Agriculture Animal Genetics, Breeding and Reproduction of Ministry of Education, College of Animal Science, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.
Abstract:
Nonsense-mediated mRNA decay (NMD) is originally identified as a conserved RNA surveillance mechanism that rapidly degrades aberrant mRNA containing premature termination codons (PTCs). However, the molecular regulation mechanisms by which microRNAs inhibit NMD has not been well understood. Here we identified that miR-4651 participated in the NMD pathway by downregulating expression levels of SMG9. We provided evidences that (1) Overexpression of miR-4651 mimic significantly inhibited the expression of SMG9 (P < 0.05); (2) NMD substrates genes, TBL2 and GADD45B were both increased at mRNA and protein expression levels when SMG9 was suppressed by siRNA, whereas decreased by SMG9 overexpression; (3) Expression of SMG9 was significantly increased but TBL2, GADD45B were significantly decreased when cells transfected with miR-4651 inhibitor (P < 0.05). These results indicated that miR-4651 regulated NMD by targeting SMG9 mRNA. Our study highlights that miR-4651 represses NMD. miR-4651 targets SMG9 and represses the expression levels of SMG9. NMD activity is decreased additionally when SMG9 is inhibited. The present study provides evidence for microRNA/NMD regulatory mechanism.
Insights
MicroRNAs regulate gene expression. This study shows miR-4651 inhibits nonsense-mediated mRNA decay (NMD) by targeting SMG9, providing new insights into microRNA-mediated gene regulation.
Area of Science:
- Molecular Biology
- RNA Biology
- Gene Regulation
Background:
- Nonsense-mediated mRNA decay (NMD) is a crucial RNA surveillance pathway.
- Mechanisms of microRNA-mediated NMD inhibition are not fully understood.
Purpose of the Study:
- To investigate the role of microRNAs in regulating NMD.
- To identify specific microRNAs and their targets involved in NMD modulation.
Main Methods:
- Utilized miR-4651 mimics and inhibitors for transfection.
- Employed siRNA to suppress SMG9 expression.
- Quantified mRNA and protein levels of SMG9, TBL2, and GADD45B.
Main Results:
- Overexpression of miR-4651 mimic decreased SMG9 expression.
- SMG9 suppression increased NMD substrates (TBL2, GADD45B) at mRNA and protein levels.
- miR-4651 inhibition increased SMG9 while decreasing NMD substrates.
Conclusions:
- miR-4651 directly targets SMG9 mRNA, downregulating its expression.
- miR-4651 functions as a repressor of the NMD pathway.
- This study elucidates a novel microRNA-mediated regulatory mechanism for NMD.
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