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The Kinome of Human Alveolar Type II and Basal Cells, and Its Reprogramming in Lung Cancer
Sonia M Leach1,2, Jay Finigan3, Vihas T Vasu4
1Department of Biomedical Research.
Abstract:
The discovery of mutant tyrosine kinases as oncogenic drivers of lung adenocarcinomas has changed the basic understanding of lung cancer development and therapy. Yet, expressed kinases (kinome) in lung cancer progenitor cells, as well as whether kinase expression and the overall kinome changes or is reprogrammed upon transformation, is incompletely understood. We hypothesized that the kinome differs between lung cancer progenitor cells, alveolar type II cells (ATII), and basal cells (BC) and that their respective kinomes undergo distinct lineage-specific reprogramming to adenocarcinomas and squamous cell carcinomas upon transformation. We performed RNA sequencing on freshly isolated human ATII, BC, and lung cancer cell lines to define the kinome in nontransformed cells and transformed cells. Our studies identified a unique kinome for ATII and BC and changes in their kinome upon transformation to their respective carcinomas.
Insights
Lung cancer progenitor cells have distinct kinase profiles. Their kinomes change upon transformation into lung adenocarcinomas and squamous cell carcinomas, revealing lineage-specific reprogramming.
Area of Science:
- Molecular biology
- Cancer research
- Cell biology
Background:
- Mutant tyrosine kinases are key drivers in lung adenocarcinoma development and therapy.
- The kinome of lung cancer progenitor cells and its reprogramming during transformation remain poorly understood.
Purpose of the Study:
- To investigate the kinome differences between lung cancer progenitor cells (alveolar type II cells and basal cells) and their transformed counterparts.
- To determine if kinome reprogramming is lineage-specific during lung cancer development.
Main Methods:
- RNA sequencing was performed on freshly isolated human alveolar type II cells, basal cells, and lung cancer cell lines.
- Comparative analysis of kinome expression in non-transformed progenitor cells and transformed carcinoma cells.
Main Results:
- Distinct kinome profiles were identified for alveolar type II cells and basal cells.
- Significant changes in kinome expression were observed upon transformation of these progenitor cells into their respective carcinomas.
Conclusions:
- Lung cancer progenitor cells possess unique kinomes that are altered during malignant transformation.
- These findings highlight lineage-specific kinome reprogramming in lung cancer, offering potential therapeutic targets.
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