Related Experiment Video
Updated: Jan 26, 2026

Using an Automated Cell Counter to Simplify Gene Expression Studies: siRNA Knockdown of IL-4 Dependent Gene Expression in Namalwa Cells
Published on: April 14, 2010
HDAC5 catalytic activity suppresses cardiomyocyte oxidative stress and NRF2 target gene expression
Tianjing Hu1, Friederike C Schreiter2, Rushita A Bagchi1
1Department of Medicine, Division of Cardiology and Consortium for Fibrosis Research & Translation, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045.
Insights
Histone deacetylase 5 (HDAC5) catalytic activity suppresses oxidative stress and antioxidant gene activation in heart cells. Inhibitors TMP195 and TMP269 activate NRF2 by targeting HDAC5, revealing a new therapeutic approach.
Area of Science:
- Cardiovascular Biology
- Epigenetics
- Redox Homeostasis
Background:
- Class IIa histone deacetylases (HDAC5 and HDAC9) repress pathological cardiomyocyte hypertrophy.
- The role of catalytic activity of class IIa HDACs in the heart is largely unknown.
- HDAC5 and HDAC9 catalytic domains are not essential for inhibiting cardiac hypertrophy.
Purpose of the Study:
- To investigate the function of catalytic activity of class IIa HDACs in cardiomyocytes.
- To determine the role of HDAC5 catalytic activity in regulating oxidative stress and antioxidant responses.
- To explore the therapeutic potential of class IIa HDAC inhibitors.
Main Methods:
- Utilized selective class IIa HDAC inhibitors (TMP195, TMP269).
- Employed shRNA-mediated knockdown of HDAC5 and HDAC9.
- Assessed mitochondrial reactive oxygen species generation and NRF2-dependent gene expression.
- Examined effects of ectopic expression of catalytically active HDAC5.
Main Results:
- Catalytic activity of HDAC5, not HDAC9, suppresses mitochondrial reactive oxygen species (ROS) production.
- HDAC5 catalytic activity inhibits the induction of NF-E2-related factor 2 (NRF2)-dependent antioxidant genes.
- Class IIa HDAC inhibitors (TMP195, TMP269) and HDAC5 knockdown stimulate NRF2 transcription in a ROS-dependent manner.
- Active HDAC5 reduces cardiomyocyte oxidative stress and NRF2 activation.
Conclusions:
- HDAC5's catalytic domain plays a crucial role in controlling cardiomyocyte redox homeostasis.
- TMP195 and TMP269 are novel NRF2 activators that function by inhibiting HDAC5 enzymatic activity.
- Targeting HDAC5 offers a potential therapeutic strategy for conditions involving oxidative stress in the heart.
Abstract:
Histone deacetylase 5 (HDAC5) and HDAC9 are class IIa HDACs that function as signal-responsive repressors of the epigenetic program for pathological cardiomyocyte hypertrophy. The conserved deacetylase domains of HDAC5 and HDAC9 are not required for inhibition of cardiac hypertrophy. Thus, the biological function of class IIa HDAC catalytic activity in the heart remains unknown. Here we demonstrate that catalytic activity of HDAC5, but not HDAC9, suppresses mitochondrial reactive oxygen species generation and subsequent induction of NF-E2-related factor 2 (NRF2)-dependent antioxidant gene expression in cardiomyocytes. Treatment of cardiomyocytes with TMP195 or TMP269, which are selective class IIa HDAC inhibitors, or shRNA-mediated knockdown of HDAC5 but not HDAC9 leads to stimulation of NRF2-mediated transcription in a reactive oxygen species-dependent manner. Conversely, ectopic expression of catalytically active HDAC5 decreases cardiomyocyte oxidative stress and represses NRF2 activation. These findings establish a role of the catalytic domain of HDAC5 in the control of cardiomyocyte redox homeostasis and define TMP195 and TMP269 as a novel class of NRF2 activators that function by suppressing the enzymatic activity of an epigenetic regulator.
Related Concept Videos
What is Gene Expression?
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
What is Gene Expression?
Chromatin Position Affects Gene Expression
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the...
Cell Specific Gene Expression
Cell Specific Gene Expression
mRNA Stability and Gene Expression
Cis-acting Elements involved in mRNA stability

