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Sparsification of long range force networks for molecular dynamics simulations
Peter Woerner1, Aditya G Nair1,2, Kunihiko Taira1,3
1Department of Mechanical Engineering, Florida A&M-Florida State University College of Engineering, Tallahassee, FL, United States of America.
Network theory simplifies atomic interactions in solids. Spectral sparsification offers an efficient method, outperforming traditional thresholding for long-range potentials, crucial for materials science simulations.
Area of Science:
- Materials Science
- Computational Physics
- Network Theory
Background:
- Atomic interactions in solids are complex and computationally intensive to model.
- Network theory provides a framework to analyze system dynamics based on interactions.
- Existing methods for simplifying atomistic models often involve approximations that can introduce errors.
Purpose of the Study:
- To develop and evaluate a spectral sparsification technique for constructing sparse atomic interaction networks.
- To compare the accuracy and efficiency of spectral sparsification against the common thresholding method.
- To quantify error propagation from local approximations to global continuum scales.
Main Methods:
- Application of network theory to model atomic interactions in solid materials.
- Development of a spectral sparsification algorithm to create sparse interaction networks.
- Comparison of spectral sparsification with a cut-off radius (threshold) method.
- Quantification of interatomic force approximation errors and their propagation.
- Implementation on surface relaxation and tensile test simulations.
Main Results:
- Spectral sparsification reduces computational complexity while preserving macroscopic conservation properties.
- For short-range potentials (Lennard-Jones), spectral sparsification yields results comparable to thresholding.
- For long-range potentials (Coulomb), spectral sparsification shows improved performance over thresholding.
- Error propagation from local approximations to global scales is assessed.
Conclusions:
- Spectral sparsification is a viable and efficient technique for modeling atomic interactions in solids.
- This method offers advantages over traditional thresholding, particularly for systems with long-range interactions.
- The network-theoretic approach provides a robust framework for materials simulations.
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