Cell-specific CRISPR-Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

Mareike D Hoffmann1,2, Sabine Aschenbrenner1,2, Stefanie Grosse1

  • 1Synthetic Biology Group, Institute for Pharmacy and Biotechnology (IPMB) and Center for Quantitative Analysis of Molecular and Cellular Biosystems (BioQuant), University of Heidelberg, Heidelberg 69120, Germany.

Nucleic Acids Research
|April 16, 2019
PubMed

Insights

Researchers developed a novel CRISPR-Cas system that precisely targets gene editing in specific cells. This Cas-ON switch uses microRNAs to control anti-CRISPR proteins, enhancing safety for genetic therapies.

Area of Science:

  • Molecular Biology
  • Gene Editing Technologies
  • Biotechnology

Background:

  • CRISPR-Cas technologies offer promising avenues for personalized genetic disorder treatments.
  • Ensuring the precision and safety of CRISPR-based therapies necessitates strategies for localized Cas activity.
  • Confining Cas activity to specific cells and tissues is crucial for therapeutic applications.

Purpose of the Study:

  • To develop a cell type-specific Cas-ON switch for precise CRISPR-Cas activity control.
  • To engineer a system that restricts CRISPR-Cas9 function to targeted cells, enhancing therapeutic safety.
  • To create a modular platform adaptable to various CRISPR-Cas orthologues.

Main Methods:

  • Designed a Cas-ON switch utilizing miRNA-regulated expression of anti-CRISPR (Acr) proteins.
  • Inserted specific microRNA target sites (miR-122, miR-1) into Acr transgene 3'UTRs for cell-specific regulation.
  • Demonstrated functionality with Streptococcus pyogenes (Spy)Cas9 and Neisseria meningitidis (Nme)Cas9 orthologues.

Main Results:

  • Achieved cell-specific Cas9 activity in hepatocytes and cardiomyocytes via Acr knockdown.
  • Successfully inhibited Cas9 activity in off-target cells, ensuring safety.
  • Demonstrated control over genome editing and gene activation using the miR-dependent AcrIIA4 system.
  • Showcased system modularity by adapting it to NmeCas9 and its inhibitors.

Conclusions:

  • The developed Cas-ON switch enables precise, cell-specific CRISPR-Cas activity.
  • This system enhances the safety and efficacy of CRISPR-based gene therapies.
  • The modular design facilitates application with diverse CRISPR-Cas orthologues and anti-CRISPR proteins.

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